5KEN (resolution: 4.30 Å)

ID Name Organism Chains bound to carbohydrates
1 Envelope glycoprotein
Q05320 (VGP_EBOZM)
Zaire ebolavirus 3 chains bound to carbohydrates
Chain A:
4 binding sites
Chain E:
3 glycosylation head interfaces
3 glycosylation body interfaces
1 N-glycosylation
2 unassigned-glycosylations
Chain K:
4 binding sites
2 glycosylation head interfaces
3 glycosylation body interfaces
2 unassigned-glycosylations
2 Envelope glycoprotein
Q05320 (VGP_EBOZM)
Zaire ebolavirus (strain Mayinga-76) 3 chains bound to carbohydrates
Chain B:
2 binding sites
1 glycosylation head interface
1 glycosylation body interface
Chain F:
2 binding sites
1 glycosylation head interface
1 glycosylation body interface
1 unassigned-glycosylation
Chain L [auth M]:
2 glycosylation head interfaces
2 glycosylation body interfaces
3 c4G7 variable Fab domain heavy chain
Heavy chain subclass: IGHV1
Homo sapiens 0 chain bound to carbohydrates
4 c4G7 variable Fab domain light chain
Light chain subclass: IGKV12 (Kappa)
Homo sapiens 0 chain bound to carbohydrates
5 c13C6 variable Fab domain light chain
Light chain subclass: IGKV6 (Kappa)
Homo sapiens 2 chains bound to carbohydrates
Chain I:
1 glycosylation head interface
Chain O [auth P]:
3 binding sites
6 c13C6 variable Fab domain heavy chain
Heavy chain subclass: IGHV8
Homo sapiens 2 chains bound to carbohydrates
Chain J:
1 glycosylation head interface
Chain P [auth Q]:
1 binding site

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
7 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 12 (3 molecules) A, B, E, F, K, L
[auth A,B,E,F,K,M]
8 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 4 (3 molecules) E, K, O
[auth E,K,P]
9 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 3 (3 molecules) E, I, J, K, O, P
[auth E,I,J,K,P,Q]

Binding sites


Related structures