6EQS (resolution: 1.32 Å)

ID Name Organism Chains bound to carbohydrates
1 NAD-dependent protein deacylase sirtuin-5, mitochondrial
Q9NXA8 (SIR5_HUMAN)
Homo sapiens 4 chains bound to carbohydrates
Chain A:
4 binding sites
Chain B:
4 binding sites
Chain C:
4 binding sites
Chain D:
5 binding sites

Chain properties


Carbohydrates


ID Description N° of binding sites Bound to chains Binding affinity
3 3-[[(~{z})-~{C}-[(2~{r} + 3~{r} + 4~{S} + 5~{r})-5-[[[[(2~{r} + 3~{S} + 4~{r} + 5~{r})-5-(6-aminopurin-9-yl)-3 + 4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxymethyl]-3 + 4-bis(oxidanyl)oxolan-2-yl]sulfanyl-~{N}-[(5~{S})-6-[[(2~{S})-3-(1~{h}-indol-3-yl)-1-oxidanylidene-1-(propan-2-ylamino)propan-2-yl]amino]-6-oxidanylidene-5-(phenylmethoxycarbonylamino)hexyl]carbonimidoyl]amino]propanoic acid 17 (4 molecules) A, B, C, D -logKd/Ki=6.43, IC50=0.37uM (PDBbind-CN) ;

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates