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6FKB
(resolution: 3.03 Å)
This structure has an issue. As a result, annotation quality might be affected:
low resolution
Select a model
Model 1
ID
Name
Organism
Chains bound to carbohydrates
1
Rhodopsin
P02699
(OPSD_BOVIN)
Bos taurus
1 chain bound to carbohydrates
Chain A
:
7 binding sites
Chain properties
This chain feature no protein-carbohydrate interface.
Entity 1 (Rhodopsin)
A
Carbohydrates
ID
Common name
Description
N° of binding sites
Bound to chains
3
zn-α-2-glycoprotein zag
2-acetamido-2-deoxy-β-D-glucopyranose
2 (2 molecules)
A
6
antenna pigment protein β chain
octyl β-D-glucopyranoside
5 (5 molecules)
A
Binding sites
Select a binding site
(Entity 3 - molecule 1) -- 6FKB_1_NAG_1 -- NAG402:A -- bound to chain A -- Cluster not attributed--
(free)
-- 37 atoms and SASA 336 A²
(Entity 3 - molecule 2) -- 6FKB_1_NAG_2 -- NAG403:A -- bound to chain A -- Cluster not attributed--
(free)
-- 7 atoms and SASA 129 A²
(Entity 6 - molecule 3) -- 6FKB_1_BOG_1 -- BOG407:A -- bound to chain A -- Cluster not attributed--
(free)
-- 18 atoms and SASA 191 A²
(Entity 6 - molecule 4) -- 6FKB_1_BOG_2 -- BOG409:A -- bound to chain A -- Cluster not attributed--
(free)
-- 60 atoms and SASA 261 A²
(Entity 6 - molecule 5) -- 6FKB_1_BOG_3 -- BOG408:A -- bound to chain A -- Cluster not attributed--
(free)
-- 64 atoms and SASA 368 A²
(Entity 6 - molecule 6) -- 6FKB_1_BOG_4 -- BOG411:A -- bound to chain A -- Cluster not attributed--
(free)
-- 10 atoms and SASA 160 A²
(Entity 6 - molecule 7) -- 6FKB_1_BOG_5 -- BOG410:A -- bound to chain A -- Cluster not attributed--
(free)
-- 21 atoms and SASA 236 A²
Related structures
Bound to carbohydrates
7MTB
6FK9
7MT8
4J4Q
7MT9
7ZBC
3OAX
3CAP
2HPY
2PED
2I37
3C9L
1U19
1F88
7MTA
1L9H
1HZX
6FK6
4BEZ
6FKC
5TE3
5EN0
8A6C
8A6D
6PH7
3DQB
6NWE
6PEL
6PGS
6FUF
3C9M
4BEY
6FKD
6FK8
2X72
6FK7
2I35
6FKA
7ZBE
2I36
8A6E
4A4M
3PXO
6QNO
4X1H
5DYS
2J4Y
2G87
5WKT
1GZM
3PQR
4PXF
6FKB
Without carbohydrates
1EDS
1EDV
1EDW
1EDX
1FDF
1JFP
1LN6
1NZS
1VQX
5TE5
6OFJ
6OY9
6OYA