6FTI (resolution: 4.20 Å)

ID Name Organism Chains bound to carbohydrates
1 Large ribosomal subunit protein uL2
G1TT27 (G1TT27_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
2 Ribosomal protein L3
G1TL06 (G1TL06_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
3 Large ribosomal subunit protein uL4
G1SVW5 (G1SVW5_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
4 Ribosomal protein L5 eukaryotic C-terminal domain-containing protein
G1SYJ6 (G1SYJ6_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
5 60S ribosomal protein L6
G1TG04 (G1TG04_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
6 Ribosomal protein L7
G1SV32 (G1SV32_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
7 60S ribosomal protein L7a
G1STW0 (G1STW0_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
8 Large ribosomal subunit protein uL6
G1SWI6 (G1SWI6_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
9 Ribosomal protein L10
B7NZQ2 (B7NZQ2_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
10 Large ribosomal subunit protein uL5
G1TUB8 (G1TUB8_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
11 eL13 Oryctolagus cuniculus 0 chain bound to carbohydrates
12 Large ribosomal subunit protein eL14
U3KNW6 (U3KNW6_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
13 Ribosomal protein L15
G1T0C1 (G1T0C1_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
14 uL13 Oryctolagus cuniculus 0 chain bound to carbohydrates
15 Large ribosomal subunit protein uL22
G1TVT6 (G1TVT6_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
16 uL14 Oryctolagus cuniculus 0 chain bound to carbohydrates
17 eL19 Oryctolagus cuniculus 0 chain bound to carbohydrates
18 eL20 Oryctolagus cuniculus 0 chain bound to carbohydrates
19 60S ribosomal protein L21
G1SHQ2 (G1SHQ2_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
20 eL22 Oryctolagus cuniculus 0 chain bound to carbohydrates
21 Large ribosomal subunit protein uL14
G1T6D1 (G1T6D1_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
22 Ribosomal protein L24
G1SE28 (G1SE28_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
23 Ribosomal protein L23/L25 N-terminal domain-containing protein
G1SE76 (G1SE76_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
24 Ribosomal protein L26
G1SQH0 (G1SQH0_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
25 60S ribosomal protein L27
G1TXF6 (G1TXF6_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
26 Large ribosomal subunit protein uL15
G1SNY0 (G1SNY0_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
27 Large ribosomal subunit protein eL29
G1TN82 (G1TN82_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
28 eL30 Oryctolagus cuniculus 0 chain bound to carbohydrates
29 Large ribosomal subunit protein eL31
G1SHG0 (G1SHG0_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
30 Ribosomal protein L32
G1TUN8 (G1TUN8_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
31 Large ribosomal subunit protein eL33
G1SF08 (G1SF08_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
32 Large ribosomal subunit protein eL34
G1U945 (G1U945_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
33 Large ribosomal subunit protein uL29
G1SIT5 (G1SIT5_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
34 60S ribosomal protein L36
G1TTQ5 (G1TTQ5_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
35 Ribosomal protein L37
U3KPD5 (U3KPD5_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
36 eL38 Oryctolagus cuniculus 0 chain bound to carbohydrates
37 Ribosomal protein L39
G1SYU7 (G1SYU7_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
38 eL40 Oryctolagus cuniculus 0 chain bound to carbohydrates
39 60S ribosomal protein L41
A0A087WNH4 (A0A087WNH4_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
40 60S ribosomal protein L36a-like
G1T040 (G1T040_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
41 60S ribosomal protein L37a
G1SY53 (G1SY53_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
42 Large ribosomal subunit protein eL28
G1U7L1 (G1U7L1_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
43 60S acidic ribosomal protein P0
G1U6N2
Oryctolagus cuniculus 0 chain bound to carbohydrates
44 Large ribosomal subunit protein uL11
G1SMR7 (G1SMR7_RABIT)
Oryctolagus cuniculus 0 chain bound to carbohydrates
49 Protein transport protein Sec61 subunit alpha isoform 1
P38377 (S61A1_CANLF)
Canis lupus familiaris 1 chain bound to carbohydrates
Chain WA [auth x]:
3 unassigned-glycosylations
50 Protein transport protein Sec61 subunit gamma
P60058 (SC61G_CANLF)
Canis lupus familiaris 0 chain bound to carbohydrates
51 Protein transport protein Sec61 subunit beta
P60467 (SC61B_CANLF)
Canis lupus familiaris 0 chain bound to carbohydrates
52 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1
E2RQ08 (RPN1_CANLF)
Canis lupus familiaris 1 chain bound to carbohydrates
Chain ZA [auth 1]:
1 unassigned-glycosylation
53 TMEM258 Canis lupus familiaris 0 chain bound to carbohydrates
54 Oligosaccharyltransferase complex subunit OSTC
P86218 (OSTC_CANLF)
Canis lupus familiaris 0 chain bound to carbohydrates
55 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4 Canis lupus familiaris 0 chain bound to carbohydrates
56 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A
F1PJP5 (STT3A_CANLF)
Canis lupus familiaris 1 chain bound to carbohydrates
Chain DB [auth 5]:
2 glycosylation head interfaces
1 glycosylation body interface
2 N-glycosylations
1 C-glycosylation
2 unassigned-glycosylations
57 DAD1 Canis lupus familiaris 0 chain bound to carbohydrates
58 OST48 Canis lupus familiaris 0 chain bound to carbohydrates
59 RPN1 Canis lupus familiaris 0 chain bound to carbohydrates
60 Unidentified TM Canis lupus familiaris 0 chain bound to carbohydrates

Chain properties


Carbohydrates


ID Description N° of binding sites Bound to chains
61 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-3)-α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) DB
[auth 5]
64 [(2~{S} + 3~{r} + 4~{r} + 5~{S} + 6~{r})-3-acetamido-6-(hydroxymethyl)-4 + 5-bis(oxidanyl)oxan-2-yl]methyl-[oxidanyl-[(2~{z} + 6~{z} + 10~{z})-3 + 7 + 11 + 15-tetramethylhexadeca-2 + 6 + 10 + 14-tetraenoxy]phosphoryl]oxy-phosphinic acid 1 (1 molecule) DB
[auth 5]

Binding sites


Related structures