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6KDB
(resolution: 2.85 Å)
Select a model
Model 1
ID
Name
Organism
Chains bound to carbohydrates
1
DNA
Q9UBC3
(DNM3B_HUMAN)
Homo sapiens
2 chains bound to carbohydrates
Chain A
:
1 binding site
Chain D
:
1 binding site
2
DNA
Q9UJW3
(DNM3L_HUMAN)
Homo sapiens
0 chain bound to carbohydrates
Chain properties
This chain feature no protein-carbohydrate interface.
Entity 1 (DNA )
A
D
Carbohydrates
ID
Description
N° of binding sites
Bound to chains
Binding affinity
4
S-adenosyl-L-homocysteine
2 (2 molecules)
A, D
IC50=300nM (BindingDB)
Binding sites
Select a binding site
(Entity 4 - molecule 1) -- 6KDB_1_SAH_1 -- SAH901:A -- bound to chain A -- Cluster not attributed--
(free)
-- 37 atoms and SASA 352 A²
(Entity 4 - molecule 4) -- 6KDB_1_SAH_2 -- SAH901:D -- bound to chain D -- Cluster not attributed--
(free)
-- 52 atoms and SASA 425 A²
Related structures
Bound to carbohydrates
6W8B
6BRR
6KDA
6KDB
6KDL
6KDP
6KDT
6PA7
6U8P
6U8V
6U8W
6U8X
6U90
6U91
7V0E
2QRV
4U7P
4U7T
5YX2
6F57
6W89
6W8D
6W8J
Without carbohydrates
3FLG
3QKJ
5CIU
5NR3
5NRR
5NRS
5NRV
5NV0
5NV2
5NV7
5NVO
6R3E
7O45
7X9D
2PV0
2PVC