6NQD (resolution: 3.90 Å)

ID Name Organism Chains bound to carbohydrates
1 Envelope glycoprotein gp160
A0A140EMT3 (A0A140EMT3_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain A:
17 glycosylation head interfaces
11 glycosylation body interfaces
16 N-glycosylations
Chain E:
17 glycosylation head interfaces
11 glycosylation body interfaces
16 N-glycosylations
Chain I:
18 glycosylation head interfaces
11 glycosylation body interfaces
16 N-glycosylations
2 Envelope glycoprotein gp160
A0A140EMT3 (A0A140EMT3_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain B:
4 glycosylation head interfaces
1 glycosylation body interface
4 N-glycosylations
Chain F:
4 glycosylation head interfaces
1 glycosylation body interface
4 N-glycosylations
Chain J:
4 glycosylation head interfaces
1 glycosylation body interface
4 N-glycosylations
3 IgG H chain
S6B2A6 (S6B2A6_HUMAN)
Heavy chain subclass: unknown
Homo sapiens 3 chains bound to carbohydrates
Chain C:
4 glycosylation head interfaces
14 glycosylation body interfaces
1 N-glycosylation
Chain G:
4 glycosylation head interfaces
14 glycosylation body interfaces
1 N-glycosylation
Chain K:
4 glycosylation head interfaces
14 glycosylation body interfaces
1 N-glycosylation
4 Immunoglobulin kappa light chain
P0DOX7 (IGK_HUMAN)
Light chain subclass: IGKV1 (Kappa)
Homo sapiens 3 chains bound to carbohydrates
Chain D:
2 glycosylation head interfaces
3 glycosylation body interfaces
Chain H:
2 glycosylation head interfaces
3 glycosylation body interfaces
Chain L:
2 glycosylation head interfaces
3 glycosylation body interfaces

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
5 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 27 (3 molecules) A, C, E, G, I, K
6 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 18 (3 molecules) A, C, E, G, I, K
7 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 42 (21 molecules) A, E, I
8 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 9 (3 molecules) A, E, I
9 α-D-mannopyranose-(1-3)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 12 (3 molecules) B, C, D, F, G, H, J, K, L
10 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 30 (30 molecules) A, B, C, D, E, F, G, H, I, J, K, L

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates