6OEJ (resolution: 3.45 Å)

ID Name Organism Chains bound to carbohydrates
1 clade A/E 93TH057 HIV-1 gp120 core
A0A0M3KKW9 (A0A0M3KKW9_9HIV1)
Human immunodeficiency virus 1 2 chains bound to carbohydrates
Chain A [auth G]:
12 glycosylation head interfaces
1 glycosylation body interface
11 N-glycosylations
Chain D [auth A]:
12 glycosylation head interfaces
1 glycosylation body interface
11 N-glycosylations
2 C11 Fab heavy chain
Heavy chain subclass: IGHV3
Homo sapiens 2 chains bound to carbohydrates
Chain B [auth H]:
2 glycosylation head interfaces
2 glycosylation body interfaces
1 N-glycosylation
Chain E [auth B]:
1 glycosylation head interface
2 glycosylation body interfaces
1 N-glycosylation
3 C11 Fab light chain
Light chain subclass: IGKV2 (Kappa)
Homo sapiens 2 chains bound to carbohydrates
Chain C [auth L]:
1 glycosylation head interface
Chain F [auth C]:
1 glycosylation head interface

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
4 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 6 (2 molecules) A, B, D, E
[auth A,B,G,H]
5 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 22 (22 molecules) A, B, C, D, F
[auth A,C,G,H,L]

Binding sites


Related structures