6PDL (resolution: 2.70 Å)

ID Name Organism Chains bound to carbohydrates
1 Glycoprotein G
O89343 (GLYCP_HENDH)
CAZy family: GH83
Hendra henipavirus 4 chains bound to carbohydrates
Chain A:
5 glycosylation head interfaces
5 glycosylation body interfaces
5 N-glycosylations
Chain C:
7 glycosylation head interfaces
5 glycosylation body interfaces
5 N-glycosylations
Chain E:
5 glycosylation head interfaces
5 glycosylation body interfaces
5 N-glycosylations
Chain G:
5 glycosylation head interfaces
5 glycosylation body interfaces
5 N-glycosylations
2 Ephrin-B2
P52799 (EFNB2_HUMAN)
Homo sapiens 4 chains bound to carbohydrates
Chain B:
2 glycosylation head interfaces
3 glycosylation body interfaces
1 N-glycosylation
Chain D:
2 glycosylation head interfaces
2 glycosylation body interfaces
1 N-glycosylation
Chain F:
2 glycosylation head interfaces
1 glycosylation body interface
1 N-glycosylation
Chain H:
4 glycosylation head interfaces
3 glycosylation body interfaces
2 N-glycosylations

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
3 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 12 (6 molecules) A, C, E, G, H
4 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-3)][α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 10 (2 molecules) A, B, G, H
5 β-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-3)][α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 5 (1 molecule) C, D
6 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 4 (2 molecules) E, G
7 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-3)][α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 4 (1 molecule) E, F
8 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 13 (13 molecules) A, B, C, D, E, F, G, H

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates