6WM2 (resolution: 3.10 Å)

ID Name Organism Chains bound to carbohydrates
1 V-type proton ATPase subunit E 1
P36543 (VATE1_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
2 V-type proton ATPase subunit G 1
O75348 (VATG1_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
3 V-type proton ATPase subunit C 1
P21283 (VATC1_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
4 V-type proton ATPase subunit H
Q9UI12 (VATH_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
5 V-type proton ATPase 116 kDa subunit a 1
Q93050 (VPP1_HUMAN)
Homo sapiens 1 chain bound to carbohydrates
Chain I [auth R]:
19 binding sites
2 glycosylation head interfaces
1 glycosylation body interface
1 N-glycosylation
6 V-type proton ATPase catalytic subunit A
P38606 (VATA_HUMAN)
Homo sapiens 1 chain bound to carbohydrates
Chain L [auth C]:
1 binding site
7 V-type proton ATPase subunit B, brain isoform
P21281 (VATB2_HUMAN)
Homo sapiens 1 chain bound to carbohydrates
Chain O [auth F]:
1 binding site
8 Type IV secretion protein Dot
Q5ZWW6 (Q5ZWW6_LEGPH)
Legionella pneumophila 0 chain bound to carbohydrates
9 V-type proton ATPase subunit D
Q9Y5K8 (VATD_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
10 V-type proton ATPase subunit F
Q16864 (VATF_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
11 V-type proton ATPase 21 kDa proteolipid subunit c''
Q99437 (VATO_HUMAN)
Homo sapiens 1 chain bound to carbohydrates
Chain U [auth 0]:
1 glycosylation head interface
12 V-type proton ATPase 16 kDa proteolipid subunit c
P27449 (VATL_HUMAN)
Homo sapiens 2 chains bound to carbohydrates
Chain X [auth 3]:
4 binding sites
Chain Y [auth 4]:
2 binding sites
13 V-type proton ATPase subunit d 1
P61421 (VA0D1_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
14 V-type proton ATPase subunit e 1
O15342 (VA0E1_HUMAN)
Homo sapiens 1 chain bound to carbohydrates
Chain FA [auth S]:
5 binding sites
1 glycosylation head interface
1 glycosylation body interface
1 N-glycosylation
15 Ribonuclease kappa
Q6P5S7 (RNK_HUMAN)
Homo sapiens 1 chain bound to carbohydrates
Chain GA [auth T]:
1 glycosylation head interface
1 glycosylation body interface
16 V-type proton ATPase subunit S1
Q15904 (VAS1_HUMAN)
Homo sapiens 1 chain bound to carbohydrates
Chain HA [auth U]:
2 binding sites
4 glycosylation head interfaces
3 glycosylation body interfaces
4 N-glycosylations
17 Renin receptor
O75787 (RENR_HUMAN)
Homo sapiens 1 chain bound to carbohydrates
Chain IA [auth V]:
1 glycosylation body interface

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
18 β-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-β-D-galactopyranose-(1-4)-[N-acetyl-α-neuraminic acid-(2-3)]β-D-galactopyranose-(1-4)-β-D-glucopyranose 5 (1 molecule) I
[auth R]
19 β-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-β-D-galactopyranose-(1-4)-[N-acetyl-α-neuraminic acid-(2-3)]β-D-galactopyranose 4 (1 molecule) I, X, Y
[auth 3,4,R]
20 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 10 (5 molecules) FA, GA, HA, I, IA
[auth R,S,T,U,V]
21 α-D-glucopyranose-(1-2)-α-D-glucopyranose-(1-3)-α-D-glucopyranose-(1-3)-α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)-α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 11 (1 molecule) FA, I, Y
[auth 4,R,S]
26 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 2 (2 molecules) HA, I, U
[auth 0,R,U]
28 α-actin-1 adenosine-5'-diphosphate 1 (1 molecule) L, O
[auth C,F]

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates