5XRT (resolution: 3.15 Å)

ID Name Organism Chains bound to carbohydrates
1 Hemagglutinin
I0AXC3 (I0AXC3_9INFA)
Influenza A virus (A/swine/Minnesota/A01134337/2010(H3N2)) 4 chains bound to carbohydrates
Chain A:
9 glycosylation head interfaces
18 glycosylation body interfaces
7 N-glycosylations
Chain C:
8 glycosylation head interfaces
15 glycosylation body interfaces
6 N-glycosylations
Chain E:
9 glycosylation head interfaces
18 glycosylation body interfaces
7 N-glycosylations
Chain G:
6 glycosylation head interfaces
6 glycosylation body interfaces
6 N-glycosylations
2 Hemagglutinin
R9XUW5 (R9XUW5_9INFA)
Influenza A virus 4 chains bound to carbohydrates
Chain B:
3 glycosylation head interfaces
2 glycosylation body interfaces
1 N-glycosylation
Chain D:
3 glycosylation head interfaces
2 glycosylation body interfaces
1 N-glycosylation
Chain F:
3 glycosylation head interfaces
2 glycosylation body interfaces
1 N-glycosylation
Chain H:
3 glycosylation head interfaces
2 glycosylation body interfaces
1 N-glycosylation

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
3 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[β-L-fucopyranose-(1-3)][α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 4 (1 molecule) A
4 α-D-mannopyranose-(1-3)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 9 (3 molecules) A, B, C, E
5 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 18 (3 molecules) A, C, E
6 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 11 (4 molecules) A, B, C, E, F, G
7 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 8 (4 molecules) A, C, E, G
8 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 4 (2 molecules) C, D
9 β-L-fucopyranose-(1-3)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 3 (1 molecule) E
10 α-D-mannopyranose-(1-3)-α-D-mannopyranose-(1-3)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 3 (1 molecule) C, E
11 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 3 (1 molecule) E
12 α-D-mannopyranose-(1-6)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 3 (1 molecule) G, H
13 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-3)-α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) G
14 α-D-mannopyranose-(1-6)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) G, H
15 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 7 (7 molecules) A, B, C, D, F, G, H

Binding sites


Related structures


Bound to carbohydrates