5W42 (resolution: 3.57 Å)

ID Name Organism Chains bound to carbohydrates
1 Hemagglutinin
I0AXC3 (I0AXC3_9INFA)
Influenza A virus (A/swine/Minnesota/A01134337/2010(H3N2)) 1 chain bound to carbohydrates
Chain A:
7 glycosylation head interfaces
7 glycosylation body interfaces
7 N-glycosylations
2 Hemagglutinin
I0AXC3 (I0AXC3_9INFA)
Influenza A virus 1 chain bound to carbohydrates
Chain B:
3 glycosylation head interfaces
2 glycosylation body interfaces
1 N-glycosylation
3 Ig-like domain-containing protein
Q6N089 (Q6N089_HUMAN)
Heavy chain subclass: IGHV1
Homo sapiens 0 chain bound to carbohydrates
4 Ig-like domain-containing protein
Q8TCD0 (Q8TCD0_HUMAN)
Light chain subclass: IGKV3 (Kappa)
Homo sapiens 0 chain bound to carbohydrates

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
5 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 5 (2 molecules) A, B
6 α-D-mannopyranose-(1-3)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 4 (1 molecule) A
7 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) A
8 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 1 (1 molecule) A, B
9 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) B
10 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 2 (2 molecules) A

Binding sites


Related structures