5VL3 (resolution: 3.10 Å)

ID Name Organism Chains bound to carbohydrates
1 B-cell receptor CD22
P20273 (CD22_HUMAN)
Homo sapiens 4 chains bound to carbohydrates
Chain A [auth Q]:
2 glycosylation head interfaces
4 glycosylation body interfaces
2 N-glycosylations
Chain B [auth R]:
2 glycosylation head interfaces
4 glycosylation body interfaces
2 N-glycosylations
Chain C [auth S]:
2 glycosylation head interfaces
4 glycosylation body interfaces
2 N-glycosylations
Chain D [auth T]:
2 glycosylation head interfaces
4 glycosylation body interfaces
2 N-glycosylations
2 IgG H chain
S6B291 (S6B291_HUMAN)
Heavy chain subclass: IGHV1
Mus musculus 4 chains bound to carbohydrates
Chain E [auth A]:
1 glycosylation head interface
1 glycosylation body interface
Chain F [auth C]:
1 glycosylation head interface
1 glycosylation body interface
Chain G [auth E]:
1 glycosylation head interface
Chain H:
1 glycosylation head interface
1 glycosylation body interface
3 Ig-like domain-containing protein
Q8TCD0 (Q8TCD0_HUMAN)
Light chain subclass: IGKV8 (Kappa)
Mus musculus 0 chain bound to carbohydrates

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
4 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 8 (4 molecules) A, B, C, D, E, F, G, H
[auth A,C,E,H,Q,R,S,T]
5 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 4 (1 molecule) A
[auth Q]
6 α-D-mannopyranose-(1-3)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 8 (2 molecules) B, D
[auth R,T]
7 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 3 (1 molecule) C
[auth S]

Binding sites


Related structures