6OKP (resolution: 3.28 Å)

ID Name Organism Chains bound to carbohydrates
1 Envelope glycoprotein gp160
B3UEZ6 (B3UEZ6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain A:
2 N-glycosylations
Chain B:
3 glycosylation head interfaces
2 N-glycosylations
Chain C:
3 glycosylation head interfaces
2 N-glycosylations
2 Envelope glycoprotein gp160
B3UES2 (B3UES2_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain D:
20 glycosylation head interfaces
16 glycosylation body interfaces
19 N-glycosylations
Chain E:
22 glycosylation head interfaces
16 glycosylation body interfaces
20 N-glycosylations
Chain F:
21 glycosylation head interfaces
14 glycosylation body interfaces
19 N-glycosylations
3 IgG H chain
S6B291 (S6B291_HUMAN)
Heavy chain subclass: IGHV4
Homo sapiens 1 chain bound to carbohydrates
Chain G [auth K]:
3 glycosylation head interfaces
9 glycosylation body interfaces
1 unassigned-glycosylation
4 IGL@ protein
Q8N5F4 (Q8N5F4_HUMAN)
Light chain subclass: unknown (unknown)
Homo sapiens 1 chain bound to carbohydrates
Chain H [auth L]:
2 glycosylation head interfaces
3 glycosylation body interfaces
5 IgG H chain
S6B291 (S6B291_HUMAN)
Heavy chain subclass: IGHV4
Homo sapiens 3 chains bound to carbohydrates
Chain I [auth M]:
3 glycosylation head interfaces
19 glycosylation body interfaces
Chain K [auth O]:
4 glycosylation head interfaces
14 glycosylation body interfaces
1 unassigned-glycosylation
Chain M [auth Q]:
4 glycosylation head interfaces
18 glycosylation body interfaces
1 unassigned-glycosylation
6 Immunoglobulin kappa constant
P01834 (IGKC_HUMAN)
Light chain subclass: IGKV3 (Kappa)
Homo sapiens 3 chains bound to carbohydrates
Chain J [auth N]:
3 glycosylation body interfaces
Chain L [auth P]:
3 glycosylation body interfaces
Chain N [auth R]:
3 glycosylation body interfaces

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
7 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 8 (1 molecule) D, I
[auth D,M]
8 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)-α-D-mannopyranose-(1-3)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 27 (3 molecules) D, E, F, I, K, M
[auth D,E,F,M,O,Q]
9 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 27 (4 molecules) D, E, F, I, J, K, L, M, N
[auth D,E,F,M,N,O,P,Q,R]
10 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 30 (15 molecules) D, E, F, K
[auth D,E,F,O]
11 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 15 (6 molecules) D, E, F
12 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-3)-α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 7 (1 molecule) E, G, H, K
[auth E,K,L,O]
13 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (1 molecule) E, G, H
[auth E,K,L]
14 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 31 (31 molecules) B, C, D, E, F, H
[auth B,C,D,E,F,L]

Binding sites


Related structures