5D9Q (resolution: 4.40 Å)

ID Name Organism Chains bound to carbohydrates
1 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain A [auth G]:
19 glycosylation head interfaces
18 glycosylation body interfaces
18 N-glycosylations
Chain F [auth A]:
19 glycosylation head interfaces
18 glycosylation body interfaces
18 N-glycosylations
Chain K [auth J]:
19 glycosylation head interfaces
18 glycosylation body interfaces
18 N-glycosylations
2 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain B:
3 glycosylation head interfaces
2 N-glycosylations
Chain G [auth C]:
3 glycosylation head interfaces
2 N-glycosylations
Chain L [auth K]:
3 glycosylation head interfaces
2 N-glycosylations
3 PGT122 light chain,Ig lambda-3 chain C regions
P0CG06
Light chain subclass: IGLV3 (Lambda)
Homo sapiens 3 chains bound to carbohydrates
Chain C [auth L]:
2 glycosylation head interfaces
6 glycosylation body interfaces
Chain H [auth E]:
2 glycosylation head interfaces
7 glycosylation body interfaces
Chain M:
2 glycosylation head interfaces
7 glycosylation body interfaces
4 IgG H chain
S6B291 (S6B291_HUMAN)
Heavy chain subclass: IGHV4
Homo sapiens 3 chains bound to carbohydrates
Chain D [auth H]:
2 glycosylation head interfaces
10 glycosylation body interfaces
Chain I [auth F]:
2 glycosylation head interfaces
10 glycosylation body interfaces
Chain N:
2 glycosylation head interfaces
10 glycosylation body interfaces
5 NIH45-46 single chain Fv
Heavy chain subclass: unknown
Homo sapiens 3 chains bound to carbohydrates
Chain E [auth D]:
2 glycosylation head interfaces
13 glycosylation body interfaces
Chain J [auth I]:
2 glycosylation head interfaces
13 glycosylation body interfaces
Chain O:
2 glycosylation head interfaces
13 glycosylation body interfaces

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
6 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 30 (9 molecules) A, B, C, E, F, G, H, J, K, L, M, O
[auth A,B,C,D,E,G,I,J,K,L,M,O]
7 α-D-mannopyranose-(1-3)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 12 (3 molecules) A, C, D, F, H, I, K, M, N
[auth A,E,F,G,H,J,L,M,N]
8 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 36 (18 molecules) A, E, F, J, K, O
[auth A,D,G,I,J,O]
9 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 33 (6 molecules) A, C, E, F, H, J, K, M, O
[auth A,D,E,G,I,J,L,M,O]
10 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 24 (3 molecules) A, E, F, J, K, O
[auth A,D,G,I,J,O]
11 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 24 (3 molecules) A, C, D, F, H, I, K, M, N
[auth A,E,F,G,H,J,L,M,N]
12 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 18 (18 molecules) A, B, E, F, G, J, K, L, O
[auth A,B,C,D,G,I,J,K,O]

Binding sites


Related structures