6VLR (resolution: 4.42 Å)

ID Name Organism Chains bound to carbohydrates
1 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain A:
4 binding sites
11 glycosylation head interfaces
11 glycosylation body interfaces
10 N-glycosylations
Chain C [auth H]:
5 binding sites
10 glycosylation head interfaces
9 glycosylation body interfaces
10 N-glycosylations
Chain E [auth G]:
8 binding sites
10 glycosylation head interfaces
3 glycosylation body interfaces
10 N-glycosylations
2 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain B:
1 binding site
1 glycosylation head interface
Chain D [auth J]:
1 binding site
1 glycosylation head interface
Chain F [auth I]:
2 glycosylation head interfaces
1 N-glycosylation
3 PGT122 Fab Heavy Chain
Heavy chain subclass: IGHV4
Homo sapiens 3 chains bound to carbohydrates
Chain G [auth C]:
2 glycosylation head interfaces
9 glycosylation body interfaces
Chain I [auth D]:
2 glycosylation head interfaces
8 glycosylation body interfaces
Chain K [auth E]:
2 glycosylation head interfaces
8 glycosylation body interfaces
4 PGT122 Fab Light Chain
Light chain subclass: IGLV3 (Lambda)
Homo sapiens 3 chains bound to carbohydrates
Chain H [auth L]:
1 glycosylation head interface
3 glycosylation body interfaces
Chain J [auth K]:
3 glycosylation head interfaces
3 glycosylation body interfaces
Chain L [auth M]:
2 glycosylation head interfaces
3 glycosylation body interfaces
5 RM20E1 Fab Heavy Chain
Heavy chain subclass: IGHV5
Macaca mulatta 0 chain bound to carbohydrates
6 RM20E1 Fab Kappa Chain
Light chain subclass: IGKV2 (Kappa)
Macaca mulatta 1 chain bound to carbohydrates
Chain N:
1 glycosylation head interface

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
7 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 13 (8 molecules) A, B, C, D
[auth A,B,H,J]
8 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 17 (4 molecules) A, C, E, G, H
[auth A,C,G,H,L]
9 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 4 (2 molecules) A, C, J
[auth A,H,K]
10 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 18 (3 molecules) A, C, E, G, H, I, J, K, L
[auth A,C,D,E,G,H,K,L,M]
11 α-D-mannopyranose-(1-3)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 8 (2 molecules) C, E, I, J, K, L
[auth D,E,G,H,K,M]
12 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 24 (24 molecules) A, C, D, E, F, J, L, N
[auth A,G,H,I,J,K,M,N]

Binding sites


Related structures