6NF5 (resolution: 3.71 Å)

ID Name Organism Chains bound to carbohydrates
1 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain A:
15 glycosylation head interfaces
12 glycosylation body interfaces
15 N-glycosylations
Chain G [auth C]:
16 glycosylation head interfaces
12 glycosylation body interfaces
15 N-glycosylations
Chain M [auth J]:
16 glycosylation head interfaces
12 glycosylation body interfaces
15 N-glycosylations
2 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain B:
4 glycosylation head interfaces
1 glycosylation body interface
3 N-glycosylations
Chain H [auth D]:
4 glycosylation head interfaces
1 glycosylation body interface
3 N-glycosylations
Chain N [auth M]:
4 glycosylation head interfaces
1 glycosylation body interface
3 N-glycosylations
3 BG18-like precursor HMP1 fragment antigen binding heavy chain
Heavy chain subclass: IGHV4
Homo sapiens 3 chains bound to carbohydrates
Chain C [auth H]:
1 glycosylation head interface
5 glycosylation body interfaces
Chain I [auth E]:
1 glycosylation head interface
5 glycosylation body interfaces
Chain O:
1 glycosylation head interface
5 glycosylation body interfaces
4 BG18-like precursor HMP1 fragment antigen binding light chain
Light chain subclass: IGLV3 (Lambda)
Homo sapiens 0 chain bound to carbohydrates
5 base-binding RM20A3 fragment antigen binding heavy chain
Heavy chain subclass: IGHV3
Macaca mulatta 3 chains bound to carbohydrates
Chain E [auth K]:
1 glycosylation head interface
Chain K [auth G]:
1 glycosylation head interface
Chain Q:
1 glycosylation head interface
6 base-binding RM20A3 fragment antigen binding light chain
Light chain subclass: IGLV2 (Lambda)
Macaca mulatta 0 chain bound to carbohydrates

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
7 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 30 (15 molecules) A, B, G, H, M, N
[auth A,B,C,D,J,M]
8 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 15 (3 molecules) A, G, M
[auth A,C,J]
9 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 18 (3 molecules) A, C, G, I, M, O
[auth A,C,E,H,J,O]
10 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 33 (33 molecules) A, B, E, G, H, K, M, N, Q
[auth A,B,C,D,G,J,K,M,Q]

Binding sites


Related structures