6OT1 (resolution: 3.50 Å)

ID Name Organism Chains bound to carbohydrates
1 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain A [auth B]:
1 glycosylation head interface
1 glycosylation body interface
1 N-glycosylation
Chain I [auth O]:
2 glycosylation head interfaces
1 glycosylation body interface
1 N-glycosylation
Chain Q [auth D]:
2 glycosylation head interfaces
1 glycosylation body interface
1 N-glycosylation
2 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain B [auth G]:
20 glycosylation head interfaces
20 glycosylation body interfaces
18 N-glycosylations
Chain J [auth E]:
20 glycosylation head interfaces
20 glycosylation body interfaces
18 N-glycosylations
Chain R [auth P]:
20 glycosylation head interfaces
20 glycosylation body interfaces
18 N-glycosylations
3 0PV-b.01 heavy
Heavy chain subclass: IGHV4
Macaca mulatta 3 chains bound to carbohydrates
Chain C [auth H]:
1 glycosylation head interface
1 glycosylation body interface
Chain K [auth A]:
1 glycosylation head interface
1 glycosylation body interface
Chain S [auth M]:
1 glycosylation head interface
1 glycosylation body interface
4 0PV-b.01 light
Light chain subclass: IGKV2 (Kappa)
Macaca mulatta 3 chains bound to carbohydrates
Chain D [auth L]:
1 glycosylation head interface
Chain L [auth C]:
1 glycosylation head interface
Chain T [auth N]:
1 glycosylation head interface
5 PGT122 heavy
Heavy chain subclass: IGHV4
Homo sapiens 3 chains bound to carbohydrates
Chain E [auth m]:
2 glycosylation head interfaces
9 glycosylation body interfaces
Chain M [auth F]:
2 glycosylation head interfaces
9 glycosylation body interfaces
Chain U [auth Q]:
2 glycosylation head interfaces
9 glycosylation body interfaces
6 PGT122 light
Light chain subclass: unknown (unknown)
Homo sapiens 3 chains bound to carbohydrates
Chain F [auth n]:
2 glycosylation head interfaces
3 glycosylation body interfaces
Chain N [auth I]:
2 glycosylation head interfaces
3 glycosylation body interfaces
Chain V [auth R]:
2 glycosylation head interfaces
3 glycosylation body interfaces
7 VRC03 heavy
Heavy chain subclass: unknown
Homo sapiens 3 chains bound to carbohydrates
Chain G [auth q]:
2 glycosylation body interfaces
Chain O [auth J]:
2 glycosylation body interfaces
Chain W [auth S]:
2 glycosylation body interfaces
8 VRC03 light
Light chain subclass: IGKV3 (Kappa)
Homo sapiens 3 chains bound to carbohydrates
Chain H [auth r]:
1 glycosylation head interface
3 glycosylation body interfaces
Chain P [auth K]:
1 glycosylation head interface
3 glycosylation body interfaces
Chain X [auth T]:
1 glycosylation head interface
3 glycosylation body interfaces

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
9 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 42 (21 molecules) A, B, C, F, I, J, K, N, Q, R, S, V
[auth A,B,D,E,G,H,I,M,O,P,R,n]
10 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 39 (9 molecules) B, E, F, G, H, J, M, N, O, P, R, U, V, W, X
[auth E,F,G,I,J,K,P,Q,R,S,T,m,n,q,r]
11 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 21 (9 molecules) B, J, R
[auth E,G,P]
12 α-D-mannopyranose-(1-3)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 12 (3 molecules) B, J, R
[auth E,G,P]
13 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 18 (3 molecules) B, E, F, J, M, N, R, U, V
[auth E,F,G,I,P,Q,R,m,n]
14 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 12 (12 molecules) B, D, I, J, L, Q, R, T
[auth C,D,E,G,L,N,O,P]

Binding sites


Related structures