6NFC (resolution: 3.43 Å)

ID Name Organism Chains bound to carbohydrates
1 base-binding RM20A3 fragment antigen binding heavy chain
Heavy chain subclass: IGHV3
Macaca mulatta 3 chains bound to carbohydrates
Chain A [auth C]:
1 glycosylation head interface
Chain G [auth J]:
1 glycosylation head interface
Chain M [auth K]:
1 glycosylation head interface
2 base-binding RM20A3 fragment antigen binding light chain
Light chain subclass: IGLV2 (Lambda)
Macaca mulatta 0 chain bound to carbohydrates
3 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain C [auth A]:
17 glycosylation head interfaces
7 glycosylation body interfaces
15 N-glycosylations
Chain I [auth E]:
16 glycosylation head interfaces
7 glycosylation body interfaces
15 N-glycosylations
Chain K [auth F]:
16 glycosylation head interfaces
7 glycosylation body interfaces
15 N-glycosylations
4 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain D [auth B]:
5 glycosylation head interfaces
1 glycosylation body interface
4 N-glycosylations
Chain J [auth G]:
5 glycosylation head interfaces
1 glycosylation body interface
4 N-glycosylations
Chain L [auth I]:
5 glycosylation head interfaces
1 glycosylation body interface
4 N-glycosylations
5 BG18-like precursor HMP42 fragment antigen binding heavy chain
Heavy chain subclass: IGHV1
Homo sapiens 1 chain bound to carbohydrates
Chain E [auth H]:
1 glycosylation head interface
1 glycosylation body interface
6 BG18-like precursor HMP42 fragment antigen binding light chain
Light chain subclass: IGLV3 (Lambda)
Homo sapiens 1 chain bound to carbohydrates
Chain F [auth L]:
1 glycosylation body interface

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
7 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 30 (15 molecules) C, D, E, F, I, J, K, L
[auth A,B,E,F,G,H,I,L]
8 α-D-mannopyranose-(1-3)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 12 (3 molecules) C, I, K
[auth A,E,F]
9 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 39 (39 molecules) A, C, D, G, I, J, K, L, M
[auth A,B,C,E,F,G,I,J,K]

Binding sites


Related structures