6DFG (resolution: 4.42 Å)

ID Name Organism Chains bound to carbohydrates
1 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain A:
15 glycosylation head interfaces
16 glycosylation body interfaces
15 N-glycosylations
Chain E [auth C]:
15 glycosylation head interfaces
16 glycosylation body interfaces
15 N-glycosylations
Chain I [auth D]:
15 glycosylation head interfaces
16 glycosylation body interfaces
15 N-glycosylations
2 Envelope glycoprotein gp160
Q2N0S8 (Q2N0S8_9HIV1)
Human immunodeficiency virus 1 0 chain bound to carbohydrates
3 mature BG18 fragment antigen binding heavy chain
Heavy chain subclass: unknown
Homo sapiens 3 chains bound to carbohydrates
Chain C [auth H]:
2 glycosylation head interfaces
12 glycosylation body interfaces
1 N-glycosylation
Chain G:
2 glycosylation head interfaces
12 glycosylation body interfaces
1 N-glycosylation
Chain K [auth I]:
2 glycosylation head interfaces
12 glycosylation body interfaces
1 N-glycosylation
4 mature BG18 fragment antigen binding light chain
Light chain subclass: IGLV3 (Lambda)
Homo sapiens 3 chains bound to carbohydrates
Chain D [auth L]:
1 glycosylation head interface
5 glycosylation body interfaces
Chain H [auth J]:
1 glycosylation head interface
5 glycosylation body interfaces
Chain L [auth K]:
1 glycosylation head interface
5 glycosylation body interfaces

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
5 α-D-mannopyranose-(1-3)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 9 (3 molecules) A, D, E, H, I, L
[auth A,C,D,J,K,L]
6 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 30 (15 molecules) A, E, I
[auth A,C,D]
7 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 15 (3 molecules) A, E, I
[auth A,C,D]
8 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (3 molecules) A, E, I
[auth A,C,D]
9 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 27 (3 molecules) A, C, D, E, G, H, I, K, L
[auth A,C,D,G,H,I,J,K,L]
10 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 18 (3 molecules) A, C, D, E, G, H, I, K, L
[auth A,C,D,G,H,I,J,K,L]
11 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 18 (18 molecules) A, C, D, E, G, H, I, K, L
[auth A,C,D,G,H,I,J,K,L]

Binding sites


Related structures