6DID (resolution: 4.71 Å)

ID Name Organism Chains bound to carbohydrates
1 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain A:
18 glycosylation head interfaces
15 glycosylation body interfaces
17 N-glycosylations
Chain C [auth F]:
18 glycosylation head interfaces
15 glycosylation body interfaces
17 N-glycosylations
Chain E [auth G]:
18 glycosylation head interfaces
15 glycosylation body interfaces
17 N-glycosylations
2 Envelope glycoprotein gp160
Q2N0S7 (Q2N0S7_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain B:
3 glycosylation head interfaces
2 N-glycosylations
Chain D [auth I]:
3 glycosylation head interfaces
2 N-glycosylations
Chain F [auth J]:
3 glycosylation head interfaces
2 N-glycosylations
3 Ig kappa-b4 chain C region
P01840 (KAC4_RABIT)
Light chain subclass: IGKV1 (Kappa)
Oryctolagus cuniculus 3 chains bound to carbohydrates
Chain G [auth C]:
1 glycosylation head interface
2 glycosylation body interfaces
Chain I [auth E]:
1 glycosylation head interface
2 glycosylation body interfaces
Chain K [auth H]:
1 glycosylation head interface
2 glycosylation body interfaces
4 IgG heavy chain VDJ region
A0A1Y1B8B1 (A0A1Y1B8B1_RABIT)
Heavy chain subclass: IGHV1
Oryctolagus cuniculus 0 chain bound to carbohydrates

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
5 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 9 (3 molecules) A, B, C, D, E, F, G, I, K
[auth A,B,C,E,F,G,H,I,J]
6 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 42 (21 molecules) A, C, E
[auth A,F,G]
7 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-3)-α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 15 (3 molecules) A, C, E
[auth A,F,G]
8 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (3 molecules) A, C, E
[auth A,F,G]
9 α-D-mannopyranose-(1-3)-α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (3 molecules) A, C, E
[auth A,F,G]
10 α-D-mannopyranose-(1-6)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (3 molecules) A, C, E
[auth A,F,G]
11 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 21 (21 molecules) A, B, C, D, E, F
[auth A,B,F,G,I,J]

Binding sites


Related structures