5ACO (resolution: 4.36 Å)

ID Name Organism Chains bound to carbohydrates
1 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
HUMAN IMMUNODEFICIENCY VIRUS 1 3 chains bound to carbohydrates
Chain A:
18 glycosylation head interfaces
19 glycosylation body interfaces
17 N-glycosylations
Chain C:
18 glycosylation head interfaces
19 glycosylation body interfaces
17 N-glycosylations
Chain D:
18 glycosylation head interfaces
19 glycosylation body interfaces
17 N-glycosylations
2 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
HUMAN IMMUNODEFICIENCY VIRUS 1 3 chains bound to carbohydrates
Chain B:
4 glycosylation head interfaces
1 glycosylation body interface
3 N-glycosylations
Chain E:
4 glycosylation head interfaces
1 glycosylation body interface
3 N-glycosylations
Chain F:
4 glycosylation head interfaces
1 glycosylation body interface
3 N-glycosylations
3 PGT128 FAB
Heavy chain subclass: IGHV4
HOMO SAPIENS 3 chains bound to carbohydrates
Chain G:
2 glycosylation head interfaces
13 glycosylation body interfaces
Chain H:
2 glycosylation head interfaces
13 glycosylation body interfaces
Chain I:
2 glycosylation head interfaces
13 glycosylation body interfaces
4 PGT128 FAB
Light chain subclass: IGLV2 (Lambda)
HOMO SAPIENS 3 chains bound to carbohydrates
Chain J:
7 glycosylation body interfaces
Chain K:
7 glycosylation body interfaces
Chain L:
7 glycosylation body interfaces

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
5 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 36 (18 molecules) A, B, C, D, E, F
6 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 42 (21 molecules) A, B, C, D, E, F
7 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-3)-α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 33 (6 molecules) A, C, D, G, H, I
8 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (3 molecules) A, C, D
9 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 27 (3 molecules) A, C, D, G, H, I, J, K, L
10 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 9 (9 molecules) A, B, C, D, E, F

Binding sites


Related structures