5W6D (resolution: 3.20 Å)

ID Name Organism Chains bound to carbohydrates
1 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 1 chain bound to carbohydrates
Chain A [auth G]:
11 glycosylation head interfaces
13 glycosylation body interfaces
11 N-glycosylations
2 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 1 chain bound to carbohydrates
Chain B:
2 glycosylation head interfaces
1 N-glycosylation
3 109L FAB light chain
Light chain subclass: unknown (unknown)
Homo sapiens 1 chain bound to carbohydrates
Chain C [auth L]:
1 glycosylation head interface
4 glycosylation body interfaces
4 9H FAB heavy chain
Heavy chain subclass: IGHV4
Homo sapiens 1 chain bound to carbohydrates
Chain D [auth H]:
1 glycosylation head interface
7 glycosylation body interfaces
5 35022 FAB heavy chain
Heavy chain subclass: unknown
Homo sapiens 1 chain bound to carbohydrates
Chain E [auth D]:
1 glycosylation head interface
6 glycosylation body interfaces
6 35022 FAB light chain
Light chain subclass: unknown (unknown)
Homo sapiens 1 chain bound to carbohydrates
Chain F [auth E]:
4 glycosylation body interfaces

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
7 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 9 (1 molecule) A, C, D
[auth G,H,L]
8 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 7 (1 molecule) A, B, E, F
[auth B,D,E,G]
9 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)-α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (1 molecule) A
[auth G]
10 α-D-mannopyranose-(1-3)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) A
[auth G]
11 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (3 molecules) A, C
[auth G,L]
12 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) A
[auth G]
13 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 4 (4 molecules) A, B
[auth B,G]

Binding sites


Related structures