5V8L (resolution: 4.30 Å)

ID Name Organism Chains bound to carbohydrates
1 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain A:
18 glycosylation head interfaces
17 glycosylation body interfaces
17 N-glycosylations
Chain C:
18 glycosylation head interfaces
17 glycosylation body interfaces
17 N-glycosylations
Chain D:
18 glycosylation head interfaces
16 glycosylation body interfaces
17 N-glycosylations
2 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain B:
4 glycosylation head interfaces
1 glycosylation body interface
3 N-glycosylations
Chain E:
4 glycosylation head interfaces
2 glycosylation body interfaces
3 N-glycosylations
Chain F:
4 glycosylation head interfaces
1 glycosylation body interface
3 N-glycosylations
3 3BNC117 antibody, heavy chain
Heavy chain subclass: unknown
Homo sapiens 3 chains bound to carbohydrates
Chain G:
2 glycosylation head interfaces
5 glycosylation body interfaces
Chain H:
2 glycosylation head interfaces
4 glycosylation body interfaces
Chain I:
2 glycosylation head interfaces
1 glycosylation body interface
4 PGT145 antibody, heavy chain
Heavy chain subclass: IGHV1
Homo sapiens 1 chain bound to carbohydrates
Chain J:
2 glycosylation head interfaces
9 glycosylation body interfaces
5 3BNC117 antibody, light chain
Light chain subclass: IGKV1 (Kappa)
Homo sapiens 3 chains bound to carbohydrates
Chain K:
2 glycosylation head interfaces
6 glycosylation body interfaces
1 N-glycosylation
Chain L:
2 glycosylation head interfaces
6 glycosylation body interfaces
1 N-glycosylation
Chain M:
2 glycosylation head interfaces
6 glycosylation body interfaces
1 N-glycosylation
6 PGT145 antibody, light chain
Light chain subclass: IGKV2 (Kappa)
Homo sapiens 1 chain bound to carbohydrates
Chain N:
4 glycosylation body interfaces

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
7 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 56 (28 molecules) A, B, C, D, E, F, G, I, J, K, L, M
8 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 13 (5 molecules) A, C, D, H, J, N
9 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 5 (1 molecule) A
10 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (1 molecule) A, H, L
11 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (3 molecules) A, C, D, G, H
12 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-3)-α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 13 (2 molecules) C, D, G, H
13 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 20 (3 molecules) A, C, D, G, I, J, K, M, N
14 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 20 (20 molecules) A, B, C, D, E, F

Binding sites


Related structures