5T3S (resolution: 4.50 Å)

ID Name Organism Chains bound to carbohydrates
1 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 1 chain bound to carbohydrates
Chain A [auth G]:
14 glycosylation head interfaces
14 glycosylation body interfaces
14 N-glycosylations
2 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 1 chain bound to carbohydrates
Chain B:
4 glycosylation head interfaces
1 glycosylation body interface
3 N-glycosylations
3 Fab PGT124 light chain
Light chain subclass: unknown (unknown)
Homo sapiens 1 chain bound to carbohydrates
Chain C [auth L]:
4 glycosylation body interfaces
4 Fab PGT124 heavy chain
Heavy chain subclass: IGHV4
Homo sapiens 1 chain bound to carbohydrates
Chain D [auth H]:
1 glycosylation head interface
7 glycosylation body interfaces
5 Fab 35022 heavy chain
Heavy chain subclass: unknown
Homo sapiens 1 chain bound to carbohydrates
Chain E [auth D]:
1 glycosylation head interface
7 glycosylation body interfaces
6 Fab 35022 light chain
Light chain subclass: unknown (unknown)
Homo sapiens 1 chain bound to carbohydrates
Chain F [auth E]:
1 glycosylation head interface
4 glycosylation body interfaces

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
7 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (1 molecule) A
[auth G]
8 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 8 (4 molecules) A, E
[auth D,G]
9 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) A
[auth G]
10 α-D-mannopyranose-(1-3)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 4 (2 molecules) A
[auth G]
11 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 7 (1 molecule) A, B, E, F
[auth B,D,E,G]
12 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 9 (1 molecule) A, C, D
[auth G,H,L]
13 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 7 (7 molecules) A, B, F
[auth B,E,G]

Binding sites


Related structures