5FYL (resolution: 3.10 Å)

ID Name Organism Chains bound to carbohydrates
1 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)		 HUMAN IMMUNODEFICIENCY VIRUS 1 1 chain bound to carbohydrates
Chain A [auth B]:
2 glycosylation head interfaces
3 glycosylation body interfaces
3 N-glycosylations
2 35O22 ANTIBODY FAB HEAVY CHAIN
Heavy chain subclass: unknown		 HOMO SAPIENS 1 chain bound to carbohydrates
Chain B [auth D]:
1 glycosylation head interface
7 glycosylation body interfaces
3 35O22 ANTIBODY FAB LIGHT CHAIN
Light chain subclass: unknown (unknown)		 HOMO SAPIENS 1 chain bound to carbohydrates
Chain C [auth E]:
1 glycosylation head interface
4 glycosylation body interfaces
4 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)		 HUMAN IMMUNODEFICIENCY VIRUS 1 1 chain bound to carbohydrates
Chain D [auth G]:
19 glycosylation head interfaces
24 glycosylation body interfaces
18 N-glycosylations
5 PGT122 ANTIBODY FAB HEAVY CHAIN
Heavy chain subclass: IGHV4		 HOMO SAPIENS 1 chain bound to carbohydrates
Chain E [auth H]:
3 glycosylation head interfaces
16 glycosylation body interfaces
1 N-glycosylation
6 PGT122 ANTIBODY FAB LIGHT CHAIN
Light chain subclass: IGLV3 (Lambda)		 HOMO SAPIENS 1 chain bound to carbohydrates
Chain F [auth L]:
1 glycosylation head interface
6 glycosylation body interfaces

Chain properties

Carbohydrates

ID Common name Description N° of binding sites Bound to chains
7 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 4 (2 molecules) A, D
[auth B,G]
8 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 14 (2 molecules) A, B, C, D, E, F
[auth B,D,E,G,H,L]
9 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) D
[auth G]
10 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 4 (1 molecule) D, F
[auth G,L]
11 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-3)-α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) D
[auth G]
12 α-D-mannopyranose-(1-3)-α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) D
[auth G]
13 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 5 (2 molecules) B, D
[auth D,G]
14 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (1 molecule) D
[auth G]
15 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-3)-α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) D
[auth G]
16 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) D
[auth G]
17 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 8 (1 molecule) D, E, F
[auth G,H,L]
18 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (2 molecules) D, E
[auth G,H]
19 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-6)-α-D-mannopyranose-(1-6)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) D
[auth G]
20 α-D-mannopyranose-(1-3)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 4 (1 molecule) E
[auth H]
21 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 3 (3 molecules) C, D
[auth E,G]

Binding sites

Related structures

Bound to carbohydrates
Without carbohydrates