5T3Z (resolution: 3.50 Å)

ID Name Organism Chains bound to carbohydrates
1 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 1 chain bound to carbohydrates
Chain A [auth B]:
3 glycosylation head interfaces
2 glycosylation body interfaces
2 N-glycosylations
2 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 1 chain bound to carbohydrates
Chain B [auth G]:
17 glycosylation head interfaces
23 glycosylation body interfaces
17 N-glycosylations
3 10-1074 Heavy Chain
Heavy chain subclass: IGHV4
Homo sapiens 1 chain bound to carbohydrates
Chain C [auth H]:
1 glycosylation head interface
7 glycosylation body interfaces
4 10-1074 Light Chain
Light chain subclass: unknown (unknown)
Homo sapiens 1 chain bound to carbohydrates
Chain D [auth L]:
7 glycosylation body interfaces
5 IOMA Heavy Chain
Heavy chain subclass: IGHV1
Homo sapiens 1 chain bound to carbohydrates
Chain E [auth D]:
1 glycosylation head interface
10 glycosylation body interfaces
6 IOMA Light Chain
Light chain subclass: IGLV2 (Lambda)
Homo sapiens 1 chain bound to carbohydrates
Chain F [auth E]:
1 glycosylation head interface
4 glycosylation body interfaces

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
7 α-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) A
[auth B]
8 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 4 (2 molecules) A, B
[auth B,G]
9 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 8 (4 molecules) A, B
[auth B,G]
10 β-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[2-acetamido-2-deoxy-β-D-glucopyranose-(1-2)]α-D-mannopyranose-(1-3)-[β-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-2)-α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 5 (1 molecule) B, D
[auth G,L]
11 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 4 (2 molecules) B
[auth G]
12 β-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-2)-α-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-β-D-glucopyranose-(1-2)-α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (1 molecule) B, E
[auth D,G]
13 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-3)-α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 5 (1 molecule) B
[auth G]
14 β-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 5 (1 molecule) B, E, F
[auth D,E,G]
15 2-acetamido-2-deoxy-β-D-glucopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 3 (1 molecule) B, D
[auth G,L]
16 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 9 (1 molecule) B, C, D
[auth G,H,L]
17 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (1 molecule) B, E
[auth D,G]
18 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 3 (1 molecule) B
[auth G]
19 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 2 (2 molecules) B
[auth G]

Binding sites


Related structures