6VKN (resolution: 3.70 Å)

ID Name Organism Chains bound to carbohydrates
1 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain A:
19 glycosylation head interfaces
9 glycosylation body interfaces
18 N-glycosylations
Chain E [auth C]:
20 glycosylation head interfaces
9 glycosylation body interfaces
18 N-glycosylations
Chain I [auth D]:
20 glycosylation head interfaces
9 glycosylation body interfaces
18 N-glycosylations
2 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain B:
4 glycosylation head interfaces
3 glycosylation body interfaces
3 N-glycosylations
Chain F [auth E]:
4 glycosylation head interfaces
3 glycosylation body interfaces
3 N-glycosylations
Chain J [auth F]:
4 glycosylation head interfaces
3 glycosylation body interfaces
3 N-glycosylations
3 RM19R Kappa Light Chain
Light chain subclass: IGKV3 (Kappa)
Macaca mulatta 3 chains bound to carbohydrates
Chain C [auth L]:
1 glycosylation head interface
Chain G [auth J]:
1 glycosylation head interface
Chain K:
1 glycosylation head interface
4 RM19R Heavy Chain
Heavy chain subclass: IGHV4
Macaca mulatta 0 chain bound to carbohydrates

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
5 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 36 (18 molecules) A, B, E, F, I, J
[auth A,B,C,D,E,F]
6 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 15 (3 molecules) A, E, I
[auth A,C,D]
7 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 9 (3 molecules) B, F, J
[auth B,E,F]
8 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 39 (39 molecules) A, B, C, E, F, G, I, J, K
[auth A,B,C,D,E,F,J,K,L]

Binding sites


Related structures