6N1W (resolution: 4.20 Å)

ID Name Organism Chains bound to carbohydrates
1 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain A [auth 2]:
1 binding site
17 glycosylation head interfaces
15 glycosylation body interfaces
15 N-glycosylations
Chain I [auth C]:
1 binding site
17 glycosylation head interfaces
16 glycosylation body interfaces
15 N-glycosylations
Chain Q [auth c]:
1 binding site
17 glycosylation head interfaces
16 glycosylation body interfaces
15 N-glycosylations
2 DFPH-a.15 heavy chain
Heavy chain subclass: IGHV4
Macaca mulatta 0 chain bound to carbohydrates
3 DFPH-a.15 Light chain
Light chain subclass: IGKV1 (Kappa)
Macaca mulatta 0 chain bound to carbohydrates
4 PGT122 Heavy chain
Heavy chain subclass: IGHV4
Homo sapiens 3 chains bound to carbohydrates
Chain D [auth 5]:
2 glycosylation head interfaces
9 glycosylation body interfaces
Chain M:
2 glycosylation head interfaces
10 glycosylation body interfaces
Chain U [auth m]:
2 glycosylation head interfaces
9 glycosylation body interfaces
5 PGT122 Light chain
Light chain subclass: IGLV3 (Lambda)
Homo sapiens 3 chains bound to carbohydrates
Chain E [auth 6]:
2 glycosylation head interfaces
5 glycosylation body interfaces
Chain N:
2 glycosylation head interfaces
4 glycosylation body interfaces
Chain V [auth n]:
2 glycosylation head interfaces
4 glycosylation body interfaces
6 VRC03 Light chain
Light chain subclass: unknown (unknown)
Homo sapiens 3 chains bound to carbohydrates
Chain F [auth 7]:
1 glycosylation head interface
3 glycosylation body interfaces
Chain P [auth R]:
1 glycosylation head interface
3 glycosylation body interfaces
Chain X [auth r]:
1 glycosylation head interface
3 glycosylation body interfaces
7 VRC03 Heavy chain
Heavy chain subclass: unknown
Homo sapiens 3 chains bound to carbohydrates
Chain G [auth 8]:
1 glycosylation head interface
3 glycosylation body interfaces
Chain O [auth Q]:
1 glycosylation head interface
4 glycosylation body interfaces
Chain W [auth q]:
1 glycosylation head interface
3 glycosylation body interfaces
8 Envelope glycoprotein gp160
Q2N0S7 (Q2N0S7_9HIV1)
Human immunodeficiency virus 1 0 chain bound to carbohydrates

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
9 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 39 (21 molecules) A, E, I, N, Q, V
[auth 2,6,C,N,c,n]
10 α-D-mannopyranose-(1-3)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 30 (9 molecules) A, D, E, F, G, I, M, N, O, P, Q, U, V, W, X
[auth 2,5,6,7,8,C,M,N,Q,R,c,m,n,q,r]
11 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 14 (3 molecules) A, G, I, O, Q, W
[auth 2,8,C,Q,c,q]
12 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (3 molecules) A, I, Q
[auth 2,C,c]
13 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 24 (3 molecules) A, D, E, I, M, N, Q, U, V
[auth 2,5,6,C,M,N,c,m,n]
14 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 9 (9 molecules) A, G, I, O, Q, W
[auth 2,8,C,Q,c,q]

Binding sites


Related structures