6CDE (resolution: 3.80 Å)

ID Name Organism Chains bound to carbohydrates
1 vFP20.01 Heavy Chain
Heavy chain subclass: IGHV1		 Homo sapiens 2 chains bound to carbohydrates
Chain I [auth H]:
1 glycosylation head interface
1 glycosylation body interface
Chain W [auth 3]:
1 glycosylation head interface
1 glycosylation body interface
2 vFP20.01 Light chain
Light chain subclass: IGKV1 (Kappa)		 Homo sapiens 3 chains bound to carbohydrates
Chain B [auth l]:
2 glycosylation body interfaces
Chain J [auth L]:
2 glycosylation body interfaces
Chain X [auth 4]:
2 glycosylation body interfaces
3 PGT122 Heavy chain
Heavy chain subclass: IGHV4		 Homo sapiens 3 chains bound to carbohydrates
Chain C [auth M]:
2 glycosylation head interfaces
10 glycosylation body interfaces
Chain K [auth m]:
2 glycosylation head interfaces
10 glycosylation body interfaces
Chain Q [auth 7]:
2 glycosylation head interfaces
10 glycosylation body interfaces
4 PGT122 Light Chain
Light chain subclass: unknown (unknown)		 Homo sapiens 3 chains bound to carbohydrates
Chain D [auth N]:
1 glycosylation head interface
6 glycosylation body interfaces
Chain L [auth n]:
1 glycosylation head interface
6 glycosylation body interfaces
Chain R [auth 8]:
1 glycosylation head interface
6 glycosylation body interfaces
5 VRC03 Light Chain
Light chain subclass: IGKV3 (Kappa)		 Homo sapiens 3 chains bound to carbohydrates
Chain E [auth R]:
2 glycosylation body interfaces
Chain M [auth r]:
2 glycosylation body interfaces
Chain S [auth 6]:
2 glycosylation body interfaces
6 VRC03 Heavy Chain
Heavy chain subclass: unknown		 Homo sapiens 3 chains bound to carbohydrates
Chain F [auth Q]:
1 glycosylation head interface
3 glycosylation body interfaces
Chain N [auth q]:
1 glycosylation head interface
3 glycosylation body interfaces
Chain T [auth 5]:
1 glycosylation head interface
3 glycosylation body interfaces
7 Envelope glycoprotein gp160
Q2N0S7 (Q2N0S7_9HIV1)		 Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain G [auth D]:
4 glycosylation head interfaces
3 glycosylation body interfaces
3 N-glycosylations
Chain O [auth d]:
4 glycosylation head interfaces
3 glycosylation body interfaces
3 N-glycosylations
Chain U [auth 1]:
4 glycosylation head interfaces
3 glycosylation body interfaces
3 N-glycosylations
8 Envelope glycoprotein gp160
Q2N0S5 (Q2N0S5_9HIV1)		 Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain H [auth C]:
20 glycosylation head interfaces
20 glycosylation body interfaces
17 N-glycosylations
1 unassigned-glycosylation
Chain P [auth c]:
20 glycosylation head interfaces
20 glycosylation body interfaces
17 N-glycosylations
1 unassigned-glycosylation
Chain V [auth 2]:
20 glycosylation head interfaces
20 glycosylation body interfaces
17 N-glycosylations
1 unassigned-glycosylation

Chain properties

Carbohydrates

ID Common name Description N° of binding sites Bound to chains
9 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 41 (18 molecules) B, G, H, I, J, O, P, U, V, W, X
[auth 1,2,3,4,C,D,H,L,c,d,l]
10 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 24 (12 molecules) F, G, H, I, N, O, P, T, U, V, W
[auth 1,2,3,5,C,D,H,Q,c,d,q]
11 α-D-mannopyranose-(1-3)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 12 (3 molecules) C, D, H, K, L, P, Q, R, V
[auth 2,7,8,C,M,N,c,m,n]
12 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 15 (3 molecules) D, H, L, P, R, V
[auth 2,8,C,N,c,n]
13 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-3)-α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 9 (3 molecules) H, P, V
[auth 2,C,c]
14 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 12 (3 molecules) E, H, M, P, S, V
[auth 2,6,C,R,c,r]
15 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 18 (3 molecules) F, H, N, P, T, V
[auth 2,5,C,Q,c,q]
16 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 21 (3 molecules) C, D, H, K, L, P, Q, R, V
[auth 2,7,8,C,M,N,c,m,n]
17 α-D-mannopyranose-(1-6)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 9 (3 molecules) C, H, K, P, Q, V
[auth 2,7,C,M,c,m]
18 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 9 (9 molecules) G, H, O, P, U, V
[auth 1,2,C,D,c,d]

Binding sites

Related structures

Bound to carbohydrates
Without carbohydrates