6NF2 (resolution: 3.70 Å)

ID Name Organism Chains bound to carbohydrates
1 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain A:
17 glycosylation head interfaces
21 glycosylation body interfaces
17 N-glycosylations
Chain G:
18 glycosylation head interfaces
21 glycosylation body interfaces
17 N-glycosylations
Chain Q:
17 glycosylation head interfaces
21 glycosylation body interfaces
17 N-glycosylations
2 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain B:
3 glycosylation head interfaces
2 N-glycosylations
Chain I:
3 glycosylation head interfaces
2 N-glycosylations
Chain R:
3 glycosylation head interfaces
2 N-glycosylations
3 VRC03 Heavy Chain
Heavy chain subclass: unknown
Homo sapiens 3 chains bound to carbohydrates
Chain C:
4 glycosylation body interfaces
Chain N:
4 glycosylation body interfaces
Chain V:
4 glycosylation body interfaces
4 VRC03 Light Chain
Light chain subclass: IGKV3 (Kappa)
Homo sapiens 3 chains bound to carbohydrates
Chain D:
1 glycosylation head interface
4 glycosylation body interfaces
Chain M:
1 glycosylation head interface
4 glycosylation body interfaces
Chain U:
1 glycosylation head interface
4 glycosylation body interfaces
5 PGT122 Heavy Chain
Heavy chain subclass: IGHV4
Homo sapiens 3 chains bound to carbohydrates
Chain E:
2 glycosylation head interfaces
9 glycosylation body interfaces
Chain J:
2 glycosylation head interfaces
9 glycosylation body interfaces
Chain S:
2 glycosylation head interfaces
9 glycosylation body interfaces
6 PGT122 Light Chain
Light chain subclass: unknown (unknown)
Homo sapiens 3 chains bound to carbohydrates
Chain F:
2 glycosylation head interfaces
5 glycosylation body interfaces
Chain K:
2 glycosylation head interfaces
4 glycosylation body interfaces
Chain T:
2 glycosylation head interfaces
4 glycosylation body interfaces
7 0PV-c.01 Heavy Chain
Heavy chain subclass: IGHV4
Homo sapiens 3 chains bound to carbohydrates
Chain H:
1 glycosylation head interface
2 glycosylation body interfaces
Chain O:
1 glycosylation head interface
2 glycosylation body interfaces
Chain W:
1 glycosylation head interface
2 glycosylation body interfaces
8 0PV-c.01 Light Chain
Light chain subclass: IGKV2 (Kappa)
Homo sapiens 3 chains bound to carbohydrates
Chain L:
1 glycosylation head interface
Chain P:
1 glycosylation head interface
Chain X:
1 glycosylation head interface

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
9 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 30 (15 molecules) A, B, F, G, H, I, K, Q, R, T
10 α-D-mannopyranose-(1-3)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 24 (6 molecules) A, C, D, E, F, G, J, K, M, N, Q, S, T, U, V
11 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 18 (6 molecules) A, F, G, K, Q, T
12 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 33 (12 molecules) A, D, G, H, M, O, Q, U, W
13 α-D-mannopyranose-(1-6)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 9 (3 molecules) A, C, G, N, Q, V
14 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 15 (3 molecules) A, G, Q
15 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 24 (3 molecules) A, E, F, G, J, K, Q, S, T
16 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 9 (9 molecules) A, B, G, I, L, P, Q, R, X

Binding sites


Related structures