5I8H (resolution: 4.30 Å)

ID Name Organism Chains bound to carbohydrates
1 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 2 chains bound to carbohydrates
Chain A:
6 binding sites
16 glycosylation head interfaces
14 glycosylation body interfaces
16 N-glycosylations
Chain C:
18 glycosylation head interfaces
19 glycosylation body interfaces
18 N-glycosylations
2 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 2 chains bound to carbohydrates
Chain B:
4 glycosylation head interfaces
3 N-glycosylations
Chain H [auth D]:
3 glycosylation head interfaces
1 glycosylation body interface
2 N-glycosylations
3 PGT122 Fab light chain
Light chain subclass: IGLV3 (Lambda)
Homo sapiens 2 chains bound to carbohydrates
Chain D [auth L]:
1 glycosylation head interface
6 glycosylation body interfaces
Chain K [auth J]:
3 glycosylation head interfaces
4 glycosylation body interfaces
4 VRC34.01 Fab heavy chain
Heavy chain subclass: IGHV1
Homo sapiens 2 chains bound to carbohydrates
Chain E:
1 glycosylation head interface
3 glycosylation body interfaces
Chain G:
1 glycosylation head interface
3 glycosylation body interfaces
5 VRC34.01 Fab light chain
Light chain subclass: IGKV1 (Kappa)
Homo sapiens 2 chains bound to carbohydrates
Chain F:
1 glycosylation head interface
6 glycosylation body interfaces
Chain I [auth H]:
1 glycosylation head interface
4 glycosylation body interfaces
6 PGT122 Fab heavy chain
Heavy chain subclass: IGHV4
Homo sapiens 2 chains bound to carbohydrates
Chain J [auth I]:
4 glycosylation head interfaces
8 glycosylation body interfaces
1 N-glycosylation
1 unassigned-glycosylation
Chain L [auth K]:
3 glycosylation head interfaces
7 glycosylation body interfaces
1 N-glycosylation

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
7 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 13 (2 molecules) A, B, C, E, F, G, H, I
[auth A,B,C,D,E,F,G,H]
8 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (2 molecules) A, C, D, K
[auth A,C,J,L]
9 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 27 (14 molecules) A, C, K
[auth A,C,J]
10 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 11 (2 molecules) A, C
11 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 9 (4 molecules) A, C, L
[auth A,C,K]
12 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 16 (2 molecules) A, C, D, J, K, L
[auth A,C,I,J,K,L]
13 α-D-mannopyranose-(1-3)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 4 (1 molecule) A, J, K
[auth A,I,J]
14 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 16 (16 molecules) A, B, C, D, H, J, L
[auth A,B,C,D,I,K,L]

Binding sites


Related structures