6OSY (resolution: 4.30 Å)

ID Name Organism Chains bound to carbohydrates
1 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain A [auth 2]:
19 glycosylation head interfaces
23 glycosylation body interfaces
17 N-glycosylations
Chain G [auth B]:
19 glycosylation head interfaces
24 glycosylation body interfaces
17 N-glycosylations
Chain P [auth K]:
19 glycosylation head interfaces
24 glycosylation body interfaces
17 N-glycosylations
2 PGT122 Heavy
Heavy chain subclass: IGHV4
Homo sapiens 3 chains bound to carbohydrates
Chain B [auth 5]:
2 glycosylation head interfaces
10 glycosylation body interfaces
Chain H [auth C]:
2 glycosylation head interfaces
10 glycosylation body interfaces
Chain R [auth M]:
2 glycosylation head interfaces
11 glycosylation body interfaces
3 PGT122 Light
Light chain subclass: unknown (unknown)
Homo sapiens 3 chains bound to carbohydrates
Chain C [auth 6]:
2 glycosylation head interfaces
7 glycosylation body interfaces
Chain I [auth D]:
2 glycosylation head interfaces
7 glycosylation body interfaces
Chain S [auth N]:
2 glycosylation head interfaces
7 glycosylation body interfaces
4 VRC03 Light
Light chain subclass: IGKV3 (Kappa)
Homo sapiens 3 chains bound to carbohydrates
Chain D [auth 7]:
1 glycosylation head interface
3 glycosylation body interfaces
Chain J [auth E]:
1 glycosylation head interface
3 glycosylation body interfaces
Chain T [auth O]:
1 glycosylation head interface
3 glycosylation body interfaces
5 VRC03 Heavy
Heavy chain subclass: unknown
Homo sapiens 3 chains bound to carbohydrates
Chain E [auth 8]:
1 glycosylation head interface
4 glycosylation body interfaces
Chain K [auth F]:
1 glycosylation head interface
4 glycosylation body interfaces
Chain U [auth P]:
1 glycosylation head interface
4 glycosylation body interfaces
6 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain F [auth A]:
3 glycosylation head interfaces
1 glycosylation body interface
2 N-glycosylations
Chain L [auth G]:
3 glycosylation head interfaces
1 glycosylation body interface
2 N-glycosylations
Chain V [auth Q]:
3 glycosylation head interfaces
1 glycosylation body interface
2 N-glycosylations
7 0PV-a.01 Heavy
Heavy chain subclass: IGHV4
Homo sapiens 3 chains bound to carbohydrates
Chain M [auth H]:
2 glycosylation head interfaces
Chain N [auth I]:
2 glycosylation head interfaces
Chain W [auth R]:
2 glycosylation head interfaces
8 0PV-a.01 Light
Light chain subclass: IGKV1 (Kappa)
Homo sapiens 3 chains bound to carbohydrates
Chain O [auth J]:
1 glycosylation head interface
1 glycosylation body interface
Chain Q [auth L]:
1 glycosylation head interface
2 glycosylation body interfaces
Chain X [auth S]:
1 glycosylation head interface
2 glycosylation body interfaces

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
9 α-D-mannopyranose-(1-3)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 35 (9 molecules) A, B, C, D, F, G, H, I, J, L, O, P, Q, R, S, T, V, X
[auth 2,5,6,7,A,B,C,D,E,G,J,K,L,M,N,O,Q,S]
10 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 36 (18 molecules) A, C, G, I, P, S
[auth 2,6,B,D,K,N]
11 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 24 (6 molecules) A, B, C, G, H, I, P, R, S
[auth 2,5,6,B,C,D,K,M,N]
12 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 15 (6 molecules) A, G, P
[auth 2,B,K]
13 α-D-mannopyranose-(1-6)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 9 (3 molecules) A, E, G, K, P, U
[auth 2,8,B,F,K,P]
14 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 15 (3 molecules) A, E, G, K, P, U
[auth 2,8,B,F,K,P]
15 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 24 (3 molecules) A, B, C, G, H, I, P, R, S
[auth 2,5,6,B,C,D,K,M,N]
16 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 9 (9 molecules) A, F, G, L, M, N, O, P, Q, V, W, X
[auth 2,A,B,G,H,I,J,K,L,Q,R,S]

Binding sites


Related structures