5C7K (resolution: 4.60 Å)

ID Name Organism Chains bound to carbohydrates
1 IgG H chain
S6B291 (S6B291_HUMAN)
Heavy chain subclass: unknown
Homo sapiens 1 chain bound to carbohydrates
Chain A:
3 glycosylation head interfaces
14 glycosylation body interfaces
2 Antibody Fab PGT128 light chain
C6KXN3
Light chain subclass: IGLV2 (Lambda)
Homo sapiens 1 chain bound to carbohydrates
Chain B:
7 glycosylation body interfaces
3 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 1 chain bound to carbohydrates
Chain C:
17 glycosylation head interfaces
18 glycosylation body interfaces
17 N-glycosylations
4 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 1 chain bound to carbohydrates
Chain D:
4 glycosylation head interfaces
1 glycosylation body interface
3 N-glycosylations
5 Immunoglobulin heavy constant gamma 1
P01857 (IGHG1_HUMAN)
Heavy chain subclass: unknown
Homo sapiens 1 chain bound to carbohydrates
Chain E:
4 glycosylation head interfaces
17 glycosylation body interfaces
2 unassigned-glycosylations
6 Immunoglobulin kappa constant
P01834 (IGKC_HUMAN)
Light chain subclass: IGKV1 (Kappa)
Homo sapiens 1 chain bound to carbohydrates
Chain F:
2 glycosylation head interfaces
6 glycosylation body interfaces

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
7 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 8 (4 molecules) A, C
8 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 15 (2 molecules) A, C, E, F
9 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 9 (1 molecule) A, B, C
10 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (1 molecule) A, C
11 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) C
12 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (3 molecules) C
13 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 7 (1 molecule) D, E, F
14 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 9 (1 molecule) C, E, F
15 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 6 (6 molecules) C, D

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates