6ORP (resolution: 4.40 Å)

ID Name Organism Chains bound to carbohydrates
1 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain A:
3 glycosylation head interfaces
3 N-glycosylations
Chain C:
4 glycosylation head interfaces
1 glycosylation body interface
3 N-glycosylations
Chain F:
4 glycosylation head interfaces
3 N-glycosylations
2 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain B:
16 glycosylation head interfaces
11 glycosylation body interfaces
14 N-glycosylations
Chain G:
15 glycosylation head interfaces
10 glycosylation body interfaces
14 N-glycosylations
Chain I:
15 glycosylation head interfaces
11 glycosylation body interfaces
14 N-glycosylations
3 Ab897NHP antibody Fab heavy chain
Heavy chain subclass: IGHV4
Macaca mulatta 2 chains bound to carbohydrates
Chain H:
1 glycosylation body interface
Chain J:
1 glycosylation body interface
4 Ab897NHP antibody Fab light chain
Light chain subclass: IGLV1 (Lambda)
Macaca mulatta 0 chain bound to carbohydrates

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
5 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 32 (16 molecules) B, C, G, I
6 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 20 (10 molecules) B, G, H, I, J
7 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 7 (2 molecules) B, I
8 α-D-mannopyranose-(1-3)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 3 (1 molecule) G
9 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 22 (22 molecules) A, B, C, F, G, I

Binding sites


Related structures