6UDK (resolution: 3.90 Å)

ID Name Organism Chains bound to carbohydrates
1 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain A [auth G]:
15 glycosylation head interfaces
8 glycosylation body interfaces
14 N-glycosylations
Chain B [auth K]:
15 glycosylation head interfaces
8 glycosylation body interfaces
14 N-glycosylations
Chain C [auth R]:
16 glycosylation head interfaces
9 glycosylation body interfaces
14 N-glycosylations
2 IgG H chain
S6B2B6 (S6B2B6_HUMAN)
Heavy chain subclass: IGHV4
Homo sapiens 3 chains bound to carbohydrates
Chain D [auth A]:
1 glycosylation head interface
6 glycosylation body interfaces
Chain F:
1 glycosylation head interface
6 glycosylation body interfaces
Chain H [auth O]:
1 glycosylation head interface
5 glycosylation body interfaces
3 IGL@ protein
Q8N355 (Q8N355_HUMAN)
Light chain subclass: unknown (unknown)
Homo sapiens 3 chains bound to carbohydrates
Chain E [auth B]:
1 glycosylation head interface
3 glycosylation body interfaces
Chain G [auth I]:
1 glycosylation head interface
3 glycosylation body interfaces
Chain I [auth P]:
1 glycosylation head interface
2 glycosylation body interfaces
4 IgG H chain
S6C4S0 (S6C4S0_HUMAN)
Heavy chain subclass: unknown
Homo sapiens 3 chains bound to carbohydrates
Chain J [auth M]:
1 glycosylation head interface
2 glycosylation body interfaces
Chain L [auth D]:
1 glycosylation head interface
2 glycosylation body interfaces
Chain N [auth H]:
1 glycosylation head interface
2 glycosylation body interfaces
5 IGK@ protein
Q6PJF2 (Q6PJF2_HUMAN)
Light chain subclass: IGKV3 (Kappa)
Homo sapiens 3 chains bound to carbohydrates
Chain K [auth N]:
1 glycosylation head interface
1 glycosylation body interface
Chain M [auth E]:
1 glycosylation head interface
2 glycosylation body interfaces
Chain O [auth L]:
1 glycosylation head interface
2 glycosylation body interfaces
6 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain P [auth C]:
1 glycosylation head interface
Chain Q [auth J]:
1 glycosylation head interface
Chain R [auth Q]:
1 glycosylation head interface

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
7 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 14 (7 molecules) A, B, C, J, K, L, N
[auth D,G,H,K,M,N,R]
8 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 10 (2 molecules) A, C, L, N
[auth D,G,H,R]
9 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (2 molecules) A, B, M, O
[auth E,G,K,L]
10 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 14 (2 molecules) A, B, D, E, F, G
[auth A,B,F,G,I,K]
11 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-3)-α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 5 (1 molecule) B, J
[auth K,M]
12 α-D-mannopyranose-(1-6)-α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (1 molecule) C, H, I
[auth O,P,R]
13 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 27 (27 molecules) A, B, C, E, G, I, P, Q, R
[auth B,C,G,I,J,K,P,Q,R]

Binding sites


Related structures