6NNJ (resolution: 2.60 Å)

ID Name Organism Chains bound to carbohydrates
1 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 1 chain bound to carbohydrates
Chain A [auth B]:
3 glycosylation head interfaces
2 N-glycosylations
2 35O22 scFv heavy chain
Heavy chain subclass: unknown
Homo sapiens 1 chain bound to carbohydrates
Chain B [auth D]:
1 glycosylation head interface
5 glycosylation body interfaces
3 35O22 scFv light chain
Light chain subclass: unknown (unknown)
Homo sapiens 1 chain bound to carbohydrates
Chain C [auth E]:
3 glycosylation body interfaces
4 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 1 chain bound to carbohydrates
Chain D [auth G]:
14 glycosylation head interfaces
11 glycosylation body interfaces
14 N-glycosylations
5 3H109L Fab heavy chain
Heavy chain subclass: IGHV4
Homo sapiens 1 chain bound to carbohydrates
Chain E [auth H]:
1 glycosylation head interface
7 glycosylation body interfaces
6 3H109L Fab light chain
Light chain subclass: unknown (unknown)
Homo sapiens 1 chain bound to carbohydrates
Chain F [auth L]:
1 glycosylation head interface
3 glycosylation body interfaces
7 CH31 scFv heavy chain
Heavy chain subclass: unknown
Homo sapiens 1 chain bound to carbohydrates
Chain G [auth U]:
1 glycosylation head interface
8 CH31 scFv light chain
Light chain subclass: unknown (unknown)
Homo sapiens 1 chain bound to carbohydrates
Chain H [auth V]:
1 glycosylation head interface
1 glycosylation body interface

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
9 α-D-mannopyranose-(1-3)-α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (1 molecule) A, B, C, D
[auth B,D,E,G]
10 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 10 (5 molecules) D, F, H
[auth G,L,V]
11 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) D
[auth G]
12 α-D-mannopyranose-(1-6)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 3 (1 molecule) D
[auth G]
13 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 9 (1 molecule) D, E, F
[auth G,H,L]
14 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 7 (7 molecules) A, D, G
[auth B,G,U]

Binding sites


Related structures