6VI0 (resolution: 3.43 Å)

ID Name Organism Chains bound to carbohydrates
1 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain A [auth B]:
2 glycosylation head interfaces
2 N-glycosylations
Chain E [auth A]:
3 glycosylation head interfaces
2 N-glycosylations
Chain I [auth F]:
3 glycosylation head interfaces
2 N-glycosylations
2 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain B [auth G]:
18 glycosylation head interfaces
11 glycosylation body interfaces
17 N-glycosylations
Chain F [auth C]:
18 glycosylation head interfaces
11 glycosylation body interfaces
17 N-glycosylations
Chain J [auth I]:
18 glycosylation head interfaces
11 glycosylation body interfaces
17 N-glycosylations
3 VRC01.23 Light chain
Light chain subclass: IGKV3 (Kappa)
Homo sapiens 3 chains bound to carbohydrates
Chain C [auth L]:
2 glycosylation head interfaces
5 glycosylation body interfaces
1 N-glycosylation
Chain G [auth D]:
2 glycosylation head interfaces
5 glycosylation body interfaces
1 N-glycosylation
Chain K [auth J]:
2 glycosylation head interfaces
5 glycosylation body interfaces
1 N-glycosylation
4 VRC01.23 Heavy chain
Heavy chain subclass: unknown
Homo sapiens 3 chains bound to carbohydrates
Chain D [auth H]:
2 glycosylation head interfaces
5 glycosylation body interfaces
Chain H [auth E]:
2 glycosylation head interfaces
5 glycosylation body interfaces
Chain L [auth K]:
2 glycosylation head interfaces
5 glycosylation body interfaces

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
5 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 18 (9 molecules) B, F, J
[auth C,G,I]
6 α-D-mannopyranose-(1-6)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 12 (3 molecules) B, D, F, H, J, L
[auth C,E,G,H,I,K]
7 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 15 (3 molecules) B, D, F, H, J, L
[auth C,E,G,H,I,K]
8 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 18 (3 molecules) B, C, D, F, G, H, J, K, L
[auth C,D,E,G,H,I,J,K,L]
9 α-D-mannopyranose-(1-3)-α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 9 (3 molecules) B, D, F, H, J, L
[auth C,E,G,H,I,K]
10 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (3 molecules) B, F, J
[auth C,G,I]
11 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 36 (36 molecules) A, B, C, E, F, G, I, J, K
[auth A,B,C,D,F,G,I,J,L]

Binding sites


Related structures