6UDJ (resolution: 2.50 Å)

ID Name Organism Chains bound to carbohydrates
1 IgG H chain
S6B2B6 (S6B2B6_HUMAN)
Heavy chain subclass: IGHV4
Homo sapiens 3 chains bound to carbohydrates
Chain A:
1 glycosylation head interface
6 glycosylation body interfaces
Chain B [auth K]:
1 glycosylation head interface
6 glycosylation body interfaces
Chain C [auth Q]:
1 glycosylation head interface
6 glycosylation body interfaces
2 IGK@ protein
Q6PIL8 (Q6PIL8_HUMAN)
Light chain subclass: IGKV3 (Kappa)
Homo sapiens 3 chains bound to carbohydrates
Chain D [auth E]:
1 glycosylation head interface
5 glycosylation body interfaces
Chain E [auth O]:
1 glycosylation head interface
5 glycosylation body interfaces
Chain F [auth I]:
1 glycosylation head interface
5 glycosylation body interfaces
3 IGL@ protein
Q8N355 (Q8N355_HUMAN)
Light chain subclass: unknown (unknown)
Homo sapiens 3 chains bound to carbohydrates
Chain G [auth B]:
3 glycosylation head interfaces
5 glycosylation body interfaces
1 unassigned-glycosylation
Chain I [auth L]:
3 glycosylation head interfaces
5 glycosylation body interfaces
1 unassigned-glycosylation
Chain K [auth R]:
3 glycosylation head interfaces
5 glycosylation body interfaces
1 unassigned-glycosylation
4 1-18 Fab Heavy Chain
Heavy chain subclass: unknown
Homo sapiens 3 chains bound to carbohydrates
Chain H [auth D]:
1 glycosylation head interface
4 glycosylation body interfaces
Chain J [auth N]:
1 glycosylation head interface
4 glycosylation body interfaces
Chain L [auth H]:
1 glycosylation head interface
4 glycosylation body interfaces
5 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain M [auth C]:
4 glycosylation head interfaces
3 N-glycosylations
Chain O [auth M]:
4 glycosylation head interfaces
3 N-glycosylations
Chain Q [auth F]:
4 glycosylation head interfaces
3 N-glycosylations
6 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain N [auth G]:
19 glycosylation head interfaces
18 glycosylation body interfaces
17 N-glycosylations
Chain P [auth J]:
19 glycosylation head interfaces
18 glycosylation body interfaces
17 N-glycosylations
Chain R [auth P]:
19 glycosylation head interfaces
18 glycosylation body interfaces
17 N-glycosylations

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
7 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 24 (3 molecules) A, B, C, G, I, K, N, P, R
[auth A,B,G,J,K,L,P,Q,R]
8 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 36 (18 molecules) M, N, O, P, Q, R
[auth C,F,G,J,M,P]
9 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 21 (6 molecules) G, I, K, N, P, R
[auth B,G,J,L,P,R]
10 α-D-mannopyranose-(1-6)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 21 (6 molecules) G, H, I, J, K, L, N, P, R
[auth B,D,G,H,J,L,N,P,R]
11 α-D-mannopyranose-(1-3)-α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 18 (3 molecules) D, E, F, N, P, R
[auth E,G,I,J,O,P]
12 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 18 (9 molecules) N, P, R
[auth G,J,P]
13 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 15 (15 molecules) M, N, O, P, Q, R
[auth C,F,G,J,M,P]

Binding sites


Related structures