5CJX (resolution: 3.58 Å)

ID Name Organism Chains bound to carbohydrates
1 8ANC195 G52K5 heavy chain, IG gamma-1 chain
Heavy chain subclass: unknown
Homo sapiens 3 chains bound to carbohydrates
Chain A:
1 binding site
4 glycosylation head interfaces
9 glycosylation body interfaces
1 unassigned-glycosylation
Chain D:
4 glycosylation head interfaces
12 glycosylation body interfaces
1 unassigned-glycosylation
Chain G [auth H]:
4 glycosylation head interfaces
15 glycosylation body interfaces
1 N-glycosylation
2 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain B:
2 glycosylation head interfaces
1 glycosylation body interface
2 N-glycosylations
Chain H [auth J]:
3 glycosylation head interfaces
2 glycosylation body interfaces
3 N-glycosylations
Chain K [auth X]:
2 glycosylation head interfaces
2 glycosylation body interfaces
2 N-glycosylations
3 8ANC195 G52K5 light chain
Light chain subclass: IGKV1 (Kappa)
Homo sapiens 3 chains bound to carbohydrates
Chain C:
1 glycosylation head interface
3 glycosylation body interfaces
Chain E:
1 glycosylation head interface
4 glycosylation body interfaces
Chain J [auth L]:
1 glycosylation head interface
4 glycosylation body interfaces
4 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain F [auth G]:
4 glycosylation head interfaces
4 glycosylation body interfaces
4 N-glycosylations
Chain I [auth K]:
4 glycosylation head interfaces
4 glycosylation body interfaces
4 N-glycosylations
Chain L [auth Y]:
5 glycosylation head interfaces
4 glycosylation body interfaces
5 N-glycosylations

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
5 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 10 (2 molecules) B, D, G, J, L
[auth B,D,H,L,Y]
6 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 10 (5 molecules) E, F, G, H, K
[auth E,G,H,J,X]
7 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 27 (3 molecules) A, D, F, G, I, L
[auth A,D,G,H,K,Y]
8 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 8 (2 molecules) A, F, G, I
[auth A,G,H,K]
9 α-D-mannopyranose-(1-3)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 8 (2 molecules) A, C, D, E, H, K
[auth A,C,D,E,J,X]
10 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (2 molecules) I, L
[auth K,Y]
11 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 6 (6 molecules) A, B, H, I, L
[auth A,B,J,K,Y]

Binding sites


Related structures