5T3X (resolution: 3.90 Å)

ID Name Organism Chains bound to carbohydrates
1 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 1 chain bound to carbohydrates
Chain A [auth B]:
3 glycosylation head interfaces
4 glycosylation body interfaces
2 N-glycosylations
2 Envelope glycoprotein gp160
Q2N0S6 (Q2N0S6_9HIV1)
Human immunodeficiency virus 1 1 chain bound to carbohydrates
Chain B [auth G]:
17 glycosylation head interfaces
30 glycosylation body interfaces
17 N-glycosylations
3 10-1074 Heavy Chain
Heavy chain subclass: IGHV4
Homo sapiens 1 chain bound to carbohydrates
Chain C [auth H]:
1 glycosylation head interface
8 glycosylation body interfaces
4 10-1074 Light Chain
Light chain subclass: unknown (unknown)
Homo sapiens 1 chain bound to carbohydrates
Chain D [auth L]:
1 glycosylation head interface
10 glycosylation body interfaces
5 IOMA Heavy Chain
Heavy chain subclass: IGHV1
Homo sapiens 1 chain bound to carbohydrates
Chain E [auth D]:
1 glycosylation head interface
10 glycosylation body interfaces
6 IOMA Light Chain
Light chain subclass: IGLV2 (Lambda)
Homo sapiens 1 chain bound to carbohydrates
Chain F [auth E]:
1 glycosylation head interface
6 glycosylation body interfaces

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
7 α-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) A
[auth B]
8 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 3 (1 molecule) A
[auth B]
9 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 3 (1 molecule) A, B
[auth B,G]
10 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 3 (1 molecule) B
[auth G]
11 β-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[2-acetamido-2-deoxy-β-D-glucopyranose-(1-2)]α-D-mannopyranose-(1-3)-[β-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-2)-[β-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)]α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 3 (1 molecule) B
[auth G]
12 β-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-2)-α-D-mannopyranose-(1-3)-[β-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-2)-α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 3 (1 molecule) B
[auth G]
13 N-acetyl-α-neuraminic acid-(2-6)-β-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-2)-α-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-β-D-glucopyranose-(1-2)-α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 8 (1 molecule) B, E
[auth D,G]
14 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (3 molecules) B
[auth G]
15 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)-α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (1 molecule) B
[auth G]
16 N-acetyl-α-neuraminic acid-(2-6)-β-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-2)-[2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)]α-D-mannopyranose-(1-3)-[N-acetyl-α-neuraminic acid-(2-6)-β-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-2)-[β-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)]α-D-mannopyranose-(1-6)][2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 7 (1 molecule) B, E, F
[auth D,E,G]
17 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose-(1-2)-α-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-β-D-glucopyranose-(1-2)-α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 4 (1 molecule) B, D
[auth G,L]
18 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 9 (1 molecule) B, C, D
[auth G,H,L]
19 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 4 (1 molecule) B, E
[auth D,G]
20 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 4 (1 molecule) B
[auth G]
21 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 3 (1 molecule) B
[auth G]
22 α-D-mannopyranose-(1-3)-α-D-mannopyranose-(1-6)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) B
[auth G]
23 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 1 (1 molecule) B
[auth G]

Binding sites


Related structures