5VOD (resolution: 5.90 Å)

ID Name Organism Chains bound to carbohydrates
1 Envelope glycoprotein H
Q6SW67 (GH_HCMVM)
Human cytomegalovirus 1 chain bound to carbohydrates
Chain A:
3 glycosylation head interfaces
5 glycosylation body interfaces
3 N-glycosylations
2 Envelope glycoprotein L
Q68674 (GL_HCMV8)
Human cytomegalovirus (strain 5508) 0 chain bound to carbohydrates
3 Uncharacterized protein UL128
P16837 (UL128_HCMVA)
Human cytomegalovirus (strain AD169) 1 chain bound to carbohydrates
Chain C:
1 glycosylation head interface
1 glycosylation body interface
4 Envelope glycoprotein UL130
F5HCP3 (UL130_HCMVM)
Human cytomegalovirus (strain Merlin) 1 chain bound to carbohydrates
Chain D:
2 glycosylation head interfaces
3 glycosylation body interfaces
2 N-glycosylations
5 Protein UL131A
F5HET4 (U131A_HCMVM)
Human cytomegalovirus (strain Merlin) 1 chain bound to carbohydrates
Chain E:
2 glycosylation head interfaces
2 glycosylation body interfaces
1 N-glycosylation
6 IgG H chain
S6B291 (S6B291_HUMAN)
Heavy chain subclass: IGHV5
Homo sapiens 0 chain bound to carbohydrates
7 Ig-like domain-containing protein
Q8TCD0 (Q8TCD0_HUMAN)
Light chain subclass: IGKV2 (Kappa)
Homo sapiens 0 chain bound to carbohydrates

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
8 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (3 molecules) A, D, E
9 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 7 (2 molecules) A, C, D, E
10 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) D

Binding sites


Related structures