6EDU (resolution: 4.06 Å)

ID Name Organism Chains bound to carbohydrates
1 Envelope glycoprotein gp160
B3UEZ6 (B3UEZ6_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain A:
2 glycosylation head interfaces
1 glycosylation body interface
2 N-glycosylations
Chain B:
3 glycosylation head interfaces
1 glycosylation body interface
2 N-glycosylations
Chain C:
3 glycosylation head interfaces
1 glycosylation body interface
2 N-glycosylations
2 Envelope glycoprotein gp160
B3UES2 (B3UES2_9HIV1)
Human immunodeficiency virus 1 3 chains bound to carbohydrates
Chain D:
17 glycosylation head interfaces
11 glycosylation body interfaces
16 N-glycosylations
Chain E:
16 glycosylation head interfaces
11 glycosylation body interfaces
16 N-glycosylations
Chain F:
16 glycosylation head interfaces
11 glycosylation body interfaces
16 N-glycosylations
3 T-cell surface glycoprotein CD4
P01730 (CD4_HUMAN)
Homo sapiens 3 chains bound to carbohydrates
Chain G:
2 glycosylation head interfaces
3 glycosylation body interfaces
Chain H:
2 glycosylation head interfaces
3 glycosylation body interfaces
Chain I:
1 glycosylation head interface
3 glycosylation body interfaces
4 21c Fab VH domain
Heavy chain subclass: IGHV1
Homo sapiens 3 chains bound to carbohydrates
Chain J:
1 glycosylation head interface
1 glycosylation body interface
Chain L:
1 glycosylation head interface
1 glycosylation body interface
Chain N:
1 glycosylation head interface
1 glycosylation body interface
5 21c Fab VL domain
Light chain subclass: IGLV1 (Lambda)
Homo sapiens 3 chains bound to carbohydrates
Chain K:
1 glycosylation body interface
Chain M:
1 glycosylation body interface
Chain O:
1 glycosylation body interface
6 8ANC195 G52K5 Fab VH domain
Heavy chain subclass: unknown
Homo sapiens 3 chains bound to carbohydrates
Chain P:
3 glycosylation head interfaces
12 glycosylation body interfaces
1 unassigned-glycosylation
Chain R:
3 glycosylation head interfaces
11 glycosylation body interfaces
1 unassigned-glycosylation
Chain T:
3 glycosylation head interfaces
11 glycosylation body interfaces
1 unassigned-glycosylation
7 8ANC195 G52K5 Fab VL domain
Light chain subclass: IGKV1 (Kappa)
Homo sapiens 3 chains bound to carbohydrates
Chain Q:
2 glycosylation head interfaces
1 glycosylation body interface
Chain S:
2 glycosylation head interfaces
1 glycosylation body interface
Chain U:
2 glycosylation head interfaces
1 glycosylation body interface

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
8 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 30 (15 molecules) A, B, C, D, E, F, J, K, L, M, N, O, P, Q, R, S, T, U
9 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 15 (3 molecules) D, E, F
10 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 15 (3 molecules) D, E, F, G, H, I, P, R, T
11 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 6 (3 molecules) D, E, F, G, H
12 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 25 (3 molecules) D, E, F, P, R, T
13 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 27 (27 molecules) A, B, C, D, E, F, Q, S, U

Binding sites


Related structures