6MDT (resolution: 3.80 Å)

ID Name Organism Chains bound to carbohydrates
1 Envelope glycoprotein gp160
B3UES2 (B3UES2_9HIV1)
Human immunodeficiency virus 1 1 chain bound to carbohydrates
Chain A [auth B]:
6 glycosylation head interfaces
3 N-glycosylations
1 unassigned-glycosylation
2 Envelope glycoprotein gp160
B3UF58 (B3UF58_9HIV1)
Human immunodeficiency virus 1 1 chain bound to carbohydrates
Chain B [auth G]:
7 binding sites
17 glycosylation head interfaces
13 glycosylation body interfaces
16 N-glycosylations
1 unassigned-glycosylation
3 35O22 Fab heavy chain
Heavy chain subclass: unknown
Homo sapiens 1 chain bound to carbohydrates
Chain C [auth D]:
3 glycosylation head interfaces
9 glycosylation body interfaces
1 unassigned-glycosylation
4 35O22 Fab light chain
Light chain subclass: unknown (unknown)
Homo sapiens 1 chain bound to carbohydrates
Chain D [auth E]:
2 glycosylation head interfaces
7 glycosylation body interfaces
5 PGT124 Fab heavy chain
Heavy chain subclass: IGHV4
Homo sapiens 1 chain bound to carbohydrates
Chain E [auth H]:
1 glycosylation head interface
5 glycosylation body interfaces
6 PGT124 Fab light chain
Light chain subclass: unknown (unknown)
Homo sapiens 1 chain bound to carbohydrates
Chain F [auth L]:
2 glycosylation head interfaces
2 glycosylation body interfaces
1 unassigned-glycosylation

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
7 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 16 (4 molecules) A, B, C, D
[auth B,D,E,G]
8 α-D-mannopyranose-(1-2)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 7 (1 molecule) A, B, C, D
[auth B,D,E,G]
9 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) B
[auth G]
10 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 8 (4 molecules) B
[auth G]
11 α-D-mannopyranose-(1-3)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 4 (2 molecules) B, F
[auth G,L]
12 α-D-mannopyranose-(1-6)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 3 (1 molecule) B
[auth G]
13 α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-2)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 7 (1 molecule) B, E, F
[auth G,H,L]
14 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 9 (9 molecules) A, B
[auth B,G]

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates