6NB6 (resolution: 4.20 Å)

ID Name Organism Chains bound to carbohydrates
1 Spike glycoprotein
P59594 (SPIKE_SARS)
SARS coronavirus 3 chains bound to carbohydrates
Chain A:
21 glycosylation head interfaces
15 glycosylation body interfaces
18 N-glycosylations
Chain B:
21 glycosylation head interfaces
14 glycosylation body interfaces
18 N-glycosylations
Chain C:
23 glycosylation head interfaces
16 glycosylation body interfaces
19 N-glycosylations
2 S230 heavy chain
Heavy chain subclass: IGHV3
Homo sapiens 0 chain bound to carbohydrates
3 S230 light chain
Light chain subclass: IGKV2 (Kappa)
Homo sapiens 0 chain bound to carbohydrates

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
4 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 55 (27 molecules) A, B, C
5 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 19 (9 molecules) A, B, C
6 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) B
7 α-D-mannopyranose-(1-6)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) B
8 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 14 (14 molecules) A, B, C

Binding sites


Related structures