7AKJ (resolution: 3.80 Å)

ID Name Organism Chains bound to carbohydrates
1 Spike glycoprotein
P59594 (SPIKE_SARS)
SARS coronavirus WH20 3 chains bound to carbohydrates
Chain A [auth C]:
4 binding sites
19 glycosylation head interfaces
9 glycosylation body interfaces
15 N-glycosylations
Chain B:
4 binding sites
19 glycosylation head interfaces
9 glycosylation body interfaces
15 N-glycosylations
Chain G [auth A]:
4 binding sites
19 glycosylation head interfaces
9 glycosylation body interfaces
15 N-glycosylations
2 47D11 neutralizing antibody heavy chain
Heavy chain subclass: IGHV4
Homo sapiens 3 chains bound to carbohydrates
Chain C [auth G]:
1 glycosylation head interface
3 glycosylation body interfaces
Chain E:
1 glycosylation head interface
3 glycosylation body interfaces
Chain H:
1 glycosylation head interface
3 glycosylation body interfaces
3 47D11 neutralizing antibody light chain
Light chain subclass: IGKV3 (Kappa)
Homo sapiens 3 chains bound to carbohydrates
Chain D [auth F]:
2 glycosylation head interfaces
6 glycosylation body interfaces
Chain F [auth D]:
2 glycosylation head interfaces
6 glycosylation body interfaces
Chain I [auth L]:
2 glycosylation head interfaces
6 glycosylation body interfaces

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
4 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 24 (12 molecules) A, B, G
[auth A,B,C]
5 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 9 (3 molecules) A, B, G
[auth A,B,C]
6 α-D-mannopyranose-(1-3)-α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-2)-[α-D-mannopyranose-(1-3)]α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-[α-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 27 (3 molecules) A, B, C, D, E, F, G, H, I
[auth A,B,C,D,E,F,G,H,L]
7 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 36 (36 molecules) A, B, D, F, G, I
[auth A,B,C,D,F,L]

Binding sites


Related structures