6OM1 (resolution: 2.66 Å)

ID Name Organism Chains bound to carbohydrates
1 Integrin alpha-V
P06756 (ITAV_HUMAN)
Homo sapiens 4 chains bound to carbohydrates
Chain A:
7 glycosylation head interfaces
12 glycosylation body interfaces
5 N-glycosylations
Chain C:
6 glycosylation head interfaces
14 glycosylation body interfaces
6 N-glycosylations
Chain E:
1 binding site
5 glycosylation head interfaces
11 glycosylation body interfaces
5 N-glycosylations
Chain G:
7 glycosylation head interfaces
15 glycosylation body interfaces
6 N-glycosylations
2 Integrin beta-8
P26012 (ITB8_HUMAN)
Homo sapiens 4 chains bound to carbohydrates
Chain B:
4 glycosylation head interfaces
5 glycosylation body interfaces
4 N-glycosylations
Chain D:
3 glycosylation head interfaces
1 glycosylation body interface
3 N-glycosylations
Chain F:
4 glycosylation head interfaces
3 glycosylation body interfaces
4 N-glycosylations
Chain H:
3 glycosylation head interfaces
4 glycosylation body interfaces
3 N-glycosylations

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
3 α-D-mannopyranose-(1-3)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 27 (7 molecules) A, B, C, G, H
4 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 11 (3 molecules) A, E, F, G
5 α-D-mannopyranose-(1-3)-α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 5 (1 molecule) A
6 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 18 (9 molecules) B, D, E, F, H
7 α-D-mannopyranose-(1-6)-α-D-mannopyranose-(1-6)-[α-D-mannopyranose-(1-3)]β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 14 (3 molecules) C, E
8 α-D-mannopyranose-(1-3)-[α-D-mannopyranose-(1-6)]α-D-mannopyranose-(1-6)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 5 (1 molecule) E, G
9 α-D-mannopyranose-(1-6)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 4 (1 molecule) G
10 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 12 (12 molecules) A, B, C, D, E, F, G

Binding sites


Related structures