6PM9 (resolution: 2.86 Å)

ID Name Organism Chains bound to carbohydrates
1 Protein O-GlcNAcase
O60502 (OGA_HUMAN)
CAZy family: GH84
Homo sapiens 4 chains bound to carbohydrates
Chain A:
1 binding site
Chain B:
1 binding site
Chain C:
1 binding site
Chain D:
1 binding site
2 Protein O-GlcNAcase
O60502 (OGA_HUMAN)
Homo sapiens 3 chains bound to carbohydrates
Chain E:
1 binding site
Chain G:
1 binding site
Chain H:
1 binding site

Chain properties


Carbohydrates


ID Description N° of binding sites Bound to chains Binding affinity
3 (3ar + 5S + 6S + 7r + 7ar)-5-(difluoromethyl)-2-(ethylamino)-5 + 6 + 7 + 7α-tetrahydro-3ah-pyrano[3 + 2-D][1 + 3]thiazole-6 + 7-diol 4 (4 molecules) A, B, C, D, E, G, H -logKd/Ki=8.10, Ki=7.9nM (PDBbind-CN),Ki=5.70nM, EC50=53nM, IC50=7.9nM (BindingDB) ; Ki=5.70nM, EC50=53nM, IC50=7.9nM (BindingDB)

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates