6V7Y (resolution: 2.34 Å)

ID Name Organism Chains bound to carbohydrates
1 Antigen-presenting glycoprotein CD1d
P15813 (CD1D_HUMAN)
Homo sapiens 1 chain bound to carbohydrates
Chain A:
1 binding site
4 glycosylation head interfaces
2 glycosylation body interfaces
4 N-glycosylations
2 Beta-2-microglobulin
P61769 (B2MG_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
3 Nanobody VHH ID5
Heavy chain subclass: IGHV1
Lama glama 1 chain bound to carbohydrates
Chain C [auth F]:
1 binding site

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
4 il-7racdw127 2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) A
5 il-7racdw127 β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 2 (1 molecule) A
6 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 2 (2 molecules) A
8 N-{(1S + 2r + 3S)-1-[(α-D-galactopyranosyloxy)methyl]-2 + 3-dihydroxyheptadecyl}hexacosanamide 1 (1 molecule) A, C
[auth A,F]

Binding sites


Related structures


Bound to carbohydrates
Without carbohydrates