7ABG (resolution: 7.80 Å)

ID Name Organism Chains bound to carbohydrates
1 Nuclear cap-binding protein subunit 1
Q09161 (NCBP1_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
2 U6 snRNA-associated Sm-like protein LSm7
Q9UK45 (LSM7_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
3 Splicing factor 3B subunit 6
Q9Y3B4 (SF3B6_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
4 Splicing factor 3A subunit 2
Q15428 (SF3A2_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
5 U5 small nuclear ribonucleoprotein 40 kDa protein
Q96DI7 (SNR40_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
6 U2 small nuclear ribonucleoprotein A'
P09661 (RU2A_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
7 U2 small nuclear ribonucleoprotein B''
P08579 (RU2B_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
8 U5 small nuclear ribonucleoprotein 200 kDa helicase
O75643 (U520_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
9 Protein BUD31 homolog
P41223 (BUD31_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
10 Nuclear cap-binding protein subunit 2
P52298 (NCBP2_HUMAN)
Homo sapiens 1 chain bound to carbohydrates
Chain J [auth A1]:
2 binding sites
12 Cell division cycle 5-like protein
Q99459 (CDC5L_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
13 Spliceosome-associated protein CWC15 homolog
Q9P013 (CWC15_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
14 U6 snRNA-associated Sm-like protein LSm2
Q9Y333 (LSM2_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
15 U6 snRNA-associated Sm-like protein LSm3
P62310 (LSM3_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
16 U6 snRNA-associated Sm-like protein LSm4
Q9Y4Z0 (LSM4_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
17 U6 snRNA-associated Sm-like protein LSm5
Q9Y4Y9 (LSM5_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
18 U6 snRNA-associated Sm-like protein LSm6
P62312 (LSM6_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
20 U6 snRNA-associated Sm-like protein LSm8
O95777 (LSM8_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
21 Microfibrillar-associated protein 1
P55081 (MFAP1_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
22 PHD finger-like domain-containing protein 5A
Q7RTV0 (PHF5A_HUMAN)
Homo sapiens 1 chain bound to carbohydrates
Chain V [auth y]:
1 unassigned-glycosylation
23 Pleiotropic regulator 1
O43660 (PLRG1_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
25 Pre-mRNA-processing-splicing factor 8
Q6P2Q9 (PRP8_HUMAN)
Homo sapiens 1 chain bound to carbohydrates
Chain Y [auth A]:
1 binding site
26 Pre-mRNA-splicing factor 38A
Q8NAV1 (PR38A_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
27 Pre-mRNA-splicing factor RBM22
Q9NW64 (RBM22_HUMAN)
Homo sapiens 1 chain bound to carbohydrates
Chain AA [auth P]:
1 unassigned-glycosylation
28 Splicing factor 3A subunit 1
Q15459 (SF3A1_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
29 Splicing factor 3A subunit 3
Q12874 (SF3A3_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
30 Transcription elongation regulator 1
O14776 (TCRG1_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
31 Splicing factor 3B subunit 1
O75533 (SF3B1_HUMAN)
Homo sapiens 1 chain bound to carbohydrates
Chain EA [auth u]:
1 unassigned-glycosylation
32 Splicing factor 3B subunit 2
Q13435 (SF3B2_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
33 Splicing factor 3B subunit 3
Q15393 (SF3B3_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
34 Splicing factor 3B subunit 4
Q15427 (SF3B4_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
35 Splicing factor 3B subunit 5
Q9BWJ5 (SF3B5_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
36 SNW domain-containing protein 1
Q13573 (SNW1_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
37 Smad nuclear-interacting protein 1
Q8TAD8 (SNIP1_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
38 Zinc finger matrin-type protein 2
Q96NC0 (ZMAT2_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
39 116 kDa U5 small nuclear ribonucleoprotein component
Q15029 (U5S1_HUMAN)
Homo sapiens 1 chain bound to carbohydrates
Chain MA [auth r]:
1 binding site
40 Serine/arginine repetitive matrix protein 1
Q8IYB3 (SRRM1_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
42 Serine/arginine-rich splicing factor 1
Q07955 (SRSF1_HUMAN)
Homo sapiens 1 chain bound to carbohydrates
Chain PA [auth A6]:
1 binding site
43 Small nuclear ribonucleoprotein Sm D2
P62316 (SMD2_HUMAN)
Homo sapiens 1 chain bound to carbohydrates
Chain QA [auth h]:
1 unassigned-glycosylation
44 Small nuclear ribonucleoprotein F
P62306 (RUXF_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
45 Small nuclear ribonucleoprotein-associated proteins B and B'
P14678 (RSMB_HUMAN)
Homo sapiens 1 chain bound to carbohydrates
Chain SA [auth m]:
1 unassigned-glycosylation
46 Small nuclear ribonucleoprotein Sm D3
P62318 (SMD3_HUMAN)
Homo sapiens 1 chain bound to carbohydrates
Chain TA [auth l]:
1 unassigned-glycosylation
47 Small nuclear ribonucleoprotein G
P62308 (RUXG_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
48 Small nuclear ribonucleoprotein E
P62304 (RUXE_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
49 Small nuclear ribonucleoprotein Sm D1
P62314 (SMD1_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
50 Ubiquitin-like protein 5
Q9BZL1 (UBL5_HUMAN)
Homo sapiens 0 chain bound to carbohydrates
51 WW domain-binding protein 11
Q9Y2W2 (WBP11_HUMAN)
Homo sapiens 0 chain bound to carbohydrates

Chain properties


Carbohydrates


ID Description N° of binding sites Bound to chains
53 guanosine-5'-triphosphate 1 (1 molecule) MA, Y
[auth A,r]
55 7-methyl-guanosine-5'-triphosphate-5'-guanosine 2 (1 molecule) J, PA
[auth A1,A6]

Binding sites


Related structures