7SHU (resolution: 2.75 Å)

ID Name Organism Chains bound to carbohydrates
1 omalizumab variant C02 VH
Heavy chain subclass: IGHV3
Homo sapiens 2 chains bound to carbohydrates
Chain A [auth E]:
1 glycosylation head interface
1 N-glycosylation
Chain D [auth C]:
1 glycosylation head interface
2 glycosylation body interfaces
1 N-glycosylation
2 omalizumab variant C02 VL
Light chain subclass: IGKV1 (Kappa)
Homo sapiens 0 chain bound to carbohydrates
3 Immunoglobulin heavy constant epsilon
P01854 (IGHE_HUMAN)
Homo sapiens 2 chains bound to carbohydrates
Chain C [auth B]:
2 glycosylation head interfaces
3 glycosylation body interfaces
1 unassigned-glycosylation
Chain F [auth A]:
1 glycosylation body interface

Chain properties


Carbohydrates


ID Common name Description N° of binding sites Bound to chains
4 α-D-mannopyranose-(1-3)-β-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-β-D-glucopyranose 4 (1 molecule) C
[auth B]
5 β-D-mannopyranose-(1-4)-[α-D-mannopyranose-(1-6)]2-acetamido-2-deoxy-β-D-glucopyranose 3 (1 molecule) C, D, F
[auth A,B,C]
6 zn-α-2-glycoprotein zag 2-acetamido-2-deoxy-β-D-glucopyranose 1 (1 molecule) A
[auth E]

Binding sites


Related structures